LOCUS       NM_001085538            1292 bp    mRNA    linear   ROD 18-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 family member
            8 (Msantd5f8), mRNA.
ACCESSION   NM_001085538 XM_887721
VERSION     NM_001085538.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Tanaka TS, Jaradat SA, Lim MK, Kargul GJ, Wang X, Grahovac MJ,
            Pantano S, Sano Y, Piao Y, Nagaraja R, Doi H, Wood WH 3rd, Becker
            KG and Ko MS.
  TITLE     Genome-wide expression profiling of mid-gestation placenta and
            embryo using a 15,000 mouse developmental cDNA microarray
  JOURNAL   Proc Natl Acad Sci U S A 97 (16), 9127-9132 (2000)
   PUBMED   10922068
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BX088570.6.
            
            On Apr 13, 2013 this sequence version replaced NM_001085538.1.
            
            Summary: This gene belongs to a family of related genes tandemly
            arranged in two clusters on chromosome 4. This family, which
            appears to be mouse-specific and composed of multiple highly
            similar members, is supported by limited transcript data. Members
            of the family maintain an intact open reading frame although the
            encoded protein has no known function. This gene is inferred from
            alignment of paralogous transcripts. [provided by RefSeq, Mar
            2013].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on paralogous alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849390, SAMN01164137
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-93                BX088570.6         41601-41693         c
            94-181              BX088570.6         40819-40906         c
            182-490             BX088570.6         40040-40348         c
            491-568             BX088570.6         39684-39761         c
            569-874             BX088570.6         38402-38707         c
            875-1292            BX088570.6         37679-38096         c
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 36.06 cM"
     gene            1..1292
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /note="Myb/SANT DNA binding domain containing 5 family
                     member 8"
                     /db_xref="GeneID:623272"
                     /db_xref="MGI:MGI:3702097"
     exon            1..93
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..1170
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /codon_start=1
                     /product="uncharacterized protein LOC623272"
                     /protein_id="NP_001079007.1"
                     /db_xref="CCDS:CCDS51208.1"
                     /db_xref="GeneID:623272"
                     /db_xref="MGI:MGI:3702097"
                     /translation="MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIW
                     ILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLC
                     NERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISP
                     GPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLD
                     LMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSS
                     SPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQH
                     VLLASLSGDNNFQLVWSPRDESSSPQ"
     exon            94..181
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
     exon            182..490
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
     exon            491..568
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
     exon            569..874
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1292
                     /gene="Msantd5f8"
                     /gene_synonym="Gm11757"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccttgcaccg cagactcttg tgaacaccgg gacacattag accctagttt cctcactggg
       61 ttcgggaaag gaagctcggg agacaaaatg cagagagaag ataaccgcgt ccaaagtgtg
      121 aggagtgaca aagaagccaa taggaggagg aggctgaggc aggaaggcca aagttcctca
      181 ggtccgtgtg atagcccgtg gactgaggat gaaatctgga tcttgctgca agagtgggca
      241 atggttgaat atgaactcgg agacccaggc aataagatgc atgcgaaggc caagtccctt
      301 agcagacgcc tctctaatcg gggtctgagg aagagcaaga atagctgtct tgatgtgatg
      361 gtgaagatga aggacctgca cacacgtctt tgtaacgaga ggcccagggc ttaccgcttg
      421 tattcgactt atgaatggat cctgtacgag atcttgggcc accccagatc ccagggaggc
      481 tatgtgccag gtctttggtt tgatgggcac agtaagccac cagcttccta tgcaccttcc
      541 ctctgcattg gtggtgccat ctctccaggc ccttccttta gcccatggac cgaccctgaa
      601 atcaagatct tcctgcagga gtggcaagtg gttgaacggg aaattggcca cccaggccag
      661 aagatcaagc agaagagcag tcttgtttgc cagcgtctct atcatcgagg cctgttcaag
      721 gacatccaaa gctgtttgga cctgatgtgg accctgaagg atctgcactc cactctcagt
      781 agagagagat caaggactgt acccttgttt tctccttata gagattatct ggaaaggatc
      841 ttcgacccca aatgtcagag aggccatgtt ccaggtgctc tgtataattg gtctggttac
      901 cacaggcctt cctcaagccc tcaaactcca atggtgatgc catctccagt ataccagcct
      961 tgggattatg gcatgtctgc gtcttctggt cagcttcatg ggaacccatc actgatcatg
     1021 tccagtcagg actcactggt tcccagatgg gacgcctgga atgccaccta tccattgcca
     1081 gttcaacatg tacttctggc ctctctctct ggagacaaca actttcagct ggtgtggtca
     1141 cctcgtgatg agagctcaag tcctcagtga agacatgtgg ggacttttct ttttcctctg
     1201 aaaaccacta agaatcttcc agcactgtat ggatcctcaa tgtttctatc ttattgtaaa
     1261 ggaaatgtga aatcaaataa atgattttaa ca
//
