LOCUS       NM_001013393            1323 bp    mRNA    linear   ROD 18-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 family member
            6 (Msantd5f6), mRNA.
ACCESSION   NM_001013393 XM_485397
VERSION     NM_001013393.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR,
            Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso
            J, Hide W and Ko MS.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BX247953.2.
            
            On Mar 20, 2005 this sequence version replaced XM_485397.1.
            
            Summary: This gene belongs to a family of related genes tandemly
            arranged in two clusters on chromosome 4. This family, which
            appears to be mouse-specific and composed of multiple highly
            similar members, is supported by limited transcript data. Members
            of the family maintain an intact open reading frame although the
            encoded protein has no known function. This gene is inferred from
            alignment of paralogous transcripts. [provided by RefSeq, Apr
            2013].
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849374, SAMN00849390
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 36.06 cM"
     gene            1..1323
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /note="Myb/SANT DNA binding domain containing 5 family
                     member 6"
                     /db_xref="GeneID:433719"
                     /db_xref="MGI:MGI:3650704"
     exon            1..123
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
     CDS             118..1182
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /codon_start=1
                     /product="uncharacterized protein LOC433719"
                     /protein_id="NP_001013411.1"
                     /db_xref="CCDS:CCDS51205.1"
                     /db_xref="GeneID:433719"
                     /db_xref="MGI:MGI:3650704"
                     /translation="MQREDNRVQSVRNDKEANRRRRLRQEGQSSSGPCDSPWTEDEIW
                     ILLQEWAMLEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLC
                     NERPRAYRLYSTYDWILYEILGHPRSQGGYVPGPWFDGHGNPPASYAHSLCIGGAISP
                     GPSFSPWTDPEIKIFLQEWQVVEREFGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLD
                     LMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRVHVPGALYNWSGYHRPSS
                     SSRTPMVMPSPVYQPWDYGMSGSSGQLPWNPSLIMSSQDSLVPRWDAWNATYPLPVQH
                     VLPASLPGDNNFQLPLSSRD"
     exon            124..211
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
     exon            212..520
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
     exon            521..598
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
     exon            599..904
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1323
                     /gene="Msantd5f6"
                     /gene_synonym="Gm11487"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgtagtagt ccagggaagt aagcagagct ccttgcaccg cagactcttg tgaacaccgg
       61 gacacattag accctagttt cctcactgtg ttcgggaaag gaagctcagg agacaaaatg
      121 cagagagaag ataaccgagt ccaaagtgtg agaaatgaca aagaagccaa taggaggagg
      181 aggctgaggc aagaaggcca aagttcctca ggtccgtgtg atagcccttg gactgaggat
      241 gaaatctgga tcttgctgca agagtgggca atgcttgaat atgaactcgg agacccaggc
      301 aataagatgc atgcgaaggc caagtccctt agcagacgcc tctctaatcg gggtctgagg
      361 aagagcaaga atagctgcct tgatgtgatg gtgaagatga aggacctgca cacacgtctt
      421 tgtaacgaga ggccccgggc ttaccgcttg tattcgactt atgattggat cctgtacgag
      481 atcttgggcc accccagatc ccagggaggc tatgtgccag gtccttggtt tgatgggcac
      541 ggtaaccccc cagcttccta tgcacattcc ctctgcattg gtggtgccat ctctccaggc
      601 ccttccttta gcccatggac cgaccctgaa attaagatct tcctgcagga gtggcaagtg
      661 gttgaacggg aatttggcca cccaggccag aagatcaagc agaagagcag tcttgtttgc
      721 cagcgtctct atcatcgagg cctgttcaag gacatccaaa gctgtttgga cctgatgtgg
      781 accctgaagg atcttcactc cactcttagt agggagagat caaggactgt acccttgttt
      841 tctccttata gagattatct ggaaaggatc ttcgatccca aatgtcagag agtccatgtt
      901 ccaggtgctc tgtataattg gtctggttac cacaggcctt cctcaagctc tcgaactcca
      961 atggtgatgc catctccagt ataccagcct tgggattatg gcatgtctgg atcttctgga
     1021 cagcttcctt ggaacccatc tctgatcatg tccagtcagg actcactggt tcccagatgg
     1081 gatgcctgga atgcaaccta tccattgcca gttcaacatg tacttccagc ctctctccct
     1141 ggagacaaca actttcagct gccgttgtct tctcgtgatt agagctcaag tcctcagtga
     1201 agacatgtgg ggacttttct ttttcctcta aaaaccacta agaatcttcc agcactgtat
     1261 ggatccttaa tgtctctatc ttattgtaaa ggaaatgtga aatcaaataa attattttga
     1321 cat
//
