LOCUS       NM_001277487            1240 bp    mRNA    linear   ROD 18-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 family member
            2 (Msantd5f2), mRNA.
ACCESSION   NM_001277487 XM_003945756
VERSION     NM_001277487.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco
            G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T,
            Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T,
            Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ,
            Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A,
            Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso
            J, Hide W and Ko MS.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BX294159.21.
            
            On Apr 14, 2013 this sequence version replaced XM_003945756.1.
            
            Summary: This gene belongs to a family of related genes tandemly
            arranged in two clusters on chromosome 4. This family, which
            appears to be mouse-specific and composed of multiple highly
            similar members, is supported by limited transcript data. Members
            of the family maintain an intact open reading frame although the
            encoded protein has no known function. This gene is inferred from
            alignment of paralogous transcripts. [provided by RefSeq, Apr
            2013].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments and paralogous data.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-39                BX294159.21        68926-68964
            40-127              BX294159.21        72079-72166
            128-436             BX294159.21        72634-72942
            437-514             BX294159.21        73221-73298
            515-820             BX294159.21        74278-74583
            821-1240            BX294159.21        74887-75306
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 36.06 cM"
     gene            1..1240
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /note="Myb/SANT DNA binding domain containing 5 family
                     member 2"
                     /db_xref="GeneID:101055863"
                     /db_xref="MGI:MGI:3702319"
     CDS             1..1116
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /codon_start=1
                     /product="uncharacterized protein LOC101055863"
                     /protein_id="NP_001264416.1"
                     /db_xref="GeneID:101055863"
                     /db_xref="MGI:MGI:3702319"
                     /translation="MNLTDYHVQLQYEREDNRVQSVRNDKEANRRRRLRQEGQSSSGP
                     CDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVM
                     VKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGPWFDGHGNPPASYA
                     TSLCIGGAISLGPSFSPWTDPEIKIFLQEWQVVEREFGHPGQKIKQKSSLVCQRLYHR
                     GLFKDIQSCLDLMWTMKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGVQ
                     YNWSGYHRPSSNPQTPMVMPSPVYQPWDYGMAASSGQLPWIPLLIMSSQDLLVPRWDA
                     WNATYPLPVQHVFQASLPGDNNFQLPWSPRDESSSPQ"
     exon            1..39
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
     exon            40..127
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
     exon            128..436
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
     exon            437..514
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
     exon            515..820
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
     exon            821..1240
                     /gene="Msantd5f2"
                     /gene_synonym="Gm11239"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaatctca ccgattacca cgtccagcta cagtatgaga gagaagataa ccgagtccaa
       61 agtgtgagaa atgacaaaga agccaatagg aggaggaggc tgaggcaaga aggccaaagt
      121 tcctcaggtc cgtgtgatag cccgtggact gaggatgaaa tctggatctt gctgcaagag
      181 tgggcaatgg ttgaatatga actcggagac ccaggcaata agatgcatgc gaaggccaag
      241 tcccttagca gacgcctctc taatcggggt ctgaggaaga gcaagaatag ctgccttgat
      301 gtgatggtga agatgaagga cctgcacaca cgtctttgta acgagaggcc ccgggcttac
      361 cgcttgtatt cgacttatga atggatcctg tacgagatct tgggccaccc cagatcccag
      421 ggaggctatg tgccaggtcc ttggtttgat gggcacggta acccaccagc ttcctatgca
      481 acttccctct gcattggtgg tgccatctct ctaggccctt cctttagccc atggaccgac
      541 cctgaaatca agatcttcct gcaggagtgg caagtggttg aacgggaatt tggccaccca
      601 ggccagaaga tcaagcagaa gagcagtctt gtttgccagc gtctctatca tcgaggcctg
      661 ttcaaggaca tccaaagctg tttggacctg atgtggacca tgaaggatct gcactccact
      721 ctcagtagag agagatcaag gactgtaccc ttgttttctc cttatagaga ttatctggaa
      781 aggatcttcg accccaaatg tcagagaggc catgttccag gtgttcagta taattggtct
      841 ggttaccaca ggccttcctc aaaccctcaa actccaatgg tgatgccatc tcctgtatac
      901 cagccttggg attatggcat ggctgcatct tctggtcagc ttccctggat cccattacta
      961 atcatgtcca gtcaggactt actggttccc agatgggatg cctggaatgc cacctatcca
     1021 ttgccagttc aacatgtatt tcaggcctct ctccctggag acaacaactt tcagctgccg
     1081 tggtcacctc gtgatgagag ctcaagtcct cagtgaagac atgtggggac ttttcttttt
     1141 cctctgaaaa ccactaagaa tcttccagca ctgtatggat cctcaatgtc tctattttat
     1201 tgtaaaggaa atgtgaaatc aaataaatta ttttgacaca
//
