LOCUS       NM_001177578            1293 bp    mRNA    linear   ROD 18-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 family member
            10 (Msantd5f10), mRNA.
ACCESSION   NM_001177578 XM_992378
VERSION     NM_001177578.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Tanaka TS, Jaradat SA, Lim MK, Kargul GJ, Wang X, Grahovac MJ,
            Pantano S, Sano Y, Piao Y, Nagaraja R, Doi H, Wood WH 3rd, Becker
            KG and Ko MS.
  TITLE     Genome-wide expression profiling of mid-gestation placenta and
            embryo using a 15,000 mouse developmental cDNA microarray
  JOURNAL   Proc Natl Acad Sci U S A 97 (16), 9127-9132 (2000)
   PUBMED   10922068
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC172045.1 and BG070130.2.
            
            On Apr 13, 2013 this sequence version replaced NM_001177578.1.
            
            Summary: This gene belongs to a family of related genes tandemly
            arranged in two clusters on chromosome 4. This family, which
            appears to be mouse-specific and composed of multiple highly
            similar members, is supported by limited transcript data. Members
            of the family maintain an intact open reading frame although the
            encoded protein has no known function. This gene is supported by
            alignment of transcripts. [provided by RefSeq, Mar 2013].
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849390, SAMN01164137
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1183              BC172045.1         1-1183
            1184-1293           BG070130.2         1-110               c
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 36.06 cM"
     gene            1..1293
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /note="Myb/SANT DNA binding domain containing 5 family
                     member 10"
                     /db_xref="GeneID:667780"
                     /db_xref="MGI:MGI:3702126"
     exon            1..93
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..1170
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /codon_start=1
                     /product="uncharacterized protein LOC667780"
                     /protein_id="NP_001171049.1"
                     /db_xref="CCDS:CCDS51209.1"
                     /db_xref="GeneID:667780"
                     /db_xref="MGI:MGI:3702126"
                     /translation="MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIW
                     ILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLC
                     NERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISP
                     GPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLD
                     LMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSS
                     SPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQH
                     VLLASLSGDNNFQLAWSPRDESSSPQ"
     exon            94..181
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
     exon            182..490
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
     exon            491..568
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
     exon            569..874
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1293
                     /gene="Msantd5f10"
                     /gene_synonym="Gm13871"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccttgcaccg cagactcttg tgaacaccgg gacacattag accctagttt cctcactggg
       61 ttcgggaaag gaagctcggg agacaaaatg cagagagaag ataaccgcgt ccaaagtgtg
      121 aggagtgaca aagaagccaa taggaggagg aggctgaggc aggaaggcca aagttcctca
      181 ggtccgtgtg atagcccgtg gactgaggat gaaatctgga tcttgctgca agagtgggca
      241 atggttgaat atgaactcgg agacccaggc aataagatgc atgcgaaggc caagtccctt
      301 agcagacgcc tctctaatcg gggtctgagg aagagcaaga atagctgtct tgatgtgatg
      361 gtgaagatga aggacctgca cacacgtctt tgtaacgaga ggcccagggc ttaccgcttg
      421 tattcgactt atgaatggat cctgtacgag atcttgggcc accccagatc ccagggaggc
      481 tatgtgccag gtctttggtt tgatgggcac agtaagccac cagcttccta tgcaccttcc
      541 ctctgcattg gtggtgccat ctctccaggc ccttccttta gcccatggac cgaccctgaa
      601 atcaagatct tcctgcagga gtggcaagtg gttgaacggg aaattggcca cccaggccag
      661 aagatcaagc agaagagcag tcttgtttgc cagcgtctct atcatcgagg cctgttcaag
      721 gacatccaaa gctgtttgga cctgatgtgg accctgaagg atctgcactc cactctcagt
      781 agagagagat caaggactgt acccttgttt tctccttata gagattatct ggaaaggatc
      841 ttcgacccca aatgtcagag aggccatgtt ccaggtgctc tgtataattg gtctggttac
      901 cacaggcctt cctcaagccc tcaaactcca atggtgatgc catctccagt ataccagcct
      961 tgggattatg gcatgtctgc gtcttctggt cagcttcatg ggaacccatc actgatcatg
     1021 tccagtcagg actcactggt tcccagatgg gacgcctgga atgccaccta tccattgcca
     1081 gttcaacatg tacttctggc ctctctctct ggagacaaca actttcagct ggcgtggtca
     1141 cctcgtgatg agagctcaag tcctcagtga agacatgtgg ggacttttct ttttcctctg
     1201 aaaaccacta agaatcttcc agcactgtat ggatcctcaa tgtttctatc ttattgtaaa
     1261 ggaaatgtga aatcaaataa atgattttaa cat
//
