LOCUS       NM_001378502            6069 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 (Msantd5),
            transcript variant 1, mRNA.
ACCESSION   NM_001378502 XM_011249338
VERSION     NM_001378502.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6069)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL645907.9.
            
            On Feb 20, 2020 this sequence version replaced XM_011249338.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189676.103042.1,
                                           SRR5189685.233764.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                AL645907.9         19475-19546
            73-367              AL645907.9         30696-30990
            368-568             AL645907.9         31311-31511
            569-656             AL645907.9         32369-32456
            657-962             AL645907.9         32955-33260
            963-6069            AL645907.9         33556-38662
FEATURES             Location/Qualifiers
     source          1..6069
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 31.02 cM"
     gene            1..6069
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /note="Myb/SANT DNA binding domain containing 5"
                     /db_xref="GeneID:622699"
                     /db_xref="MGI:MGI:3650740"
     exon            1..72
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
     exon            73..367
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
     exon            368..568
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
     CDS             563..1240
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /codon_start=1
                     /product="putative uncharacterized protein MSANTD5"
                     /protein_id="NP_001365431.1"
                     /db_xref="GeneID:622699"
                     /db_xref="MGI:MGI:3650740"
                     /translation="MQKEASQGQSLGSIEELNVGRSEEEAEQKPSGHSRSSWTDSEIR
                     IFLQEWEVVEQEVSHTSNKIHKKTKFLCQRLYHRGLKKSWKSCFHLLRNLHDLHETLC
                     NERPGIEPLFSPYAEALYKILGSSPQGSHVPGSLSDGAGDPTTPVYPQPPSYQPSDYG
                     ITVPSEQLQGNPLPMMSQEDSPFPTWEPWNPSYPLSVPHLLPGFVPGDANLQQPWSTC
                     DLHQDPQ"
     exon            569..656
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
     exon            657..962
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
     exon            963..6069
                     /gene="Msantd5"
                     /gene_synonym="Gm12569"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagtgtaca aaacaacact ccaacaagac agggtggtgc atgcctttaa tccgggcact
       61 cctgtgacag agtagaccca cccaagactg gaagacacag atttttcatc tggaactgta
      121 ggcatggagg gaacacgcct ttaatctgag ccacgccttc tgatagaatc ctatatcagg
      181 acatggaaga aggaagcatt tgctccttgg ctacaaatcg ttgcttggct agcaagtcca
      241 ttccttcatc tgcaatagag cctgcttctt caggaatcta gtgtttcctg ggacaagagg
      301 agaagtcaac taagacacac ctggagtttg ggaccttgct gtcgcagcca gatcaggacc
      361 acagcctgta ggctggggct gactcaatca catcccagag ctttataaac aactggatct
      421 ccacctggct gtcagacttg cagaagtcca gggaagtgaa cacagctcta cctacacact
      481 ccagattctc tttcactcac caggacacag cgaaccccag ttccaagact ctgtagagca
      541 caccccaagc tccgggagga aaatgcagaa agaagcaagc caaggtcaaa gtttgggaag
      601 catcgaagaa ttgaatgtgg gaaggagtga ggaggaggca gaacaaaagc cctcaggtca
      661 ttcccgtagc tcatggaccg actctgaaat caggatcttc ctgcaggagt gggaagtagt
      721 tgaacaggaa gtgagccaca caagcaacaa gattcacaag aagaccaagt ttctttgtca
      781 gcgcctctat catcggggcc tgaagaagag ctggaaaagc tgtttccacc tactgcggaa
      841 cctgcatgat ctgcacgaga ctctctgtaa tgagagacca gggattgaac ccttgttttc
      901 tccttatgca gaggccctgt acaagatcct gggctccagc ccccagggaa gccatgtccc
      961 aggttctctc tctgatgggg ctggtgaccc cacgaccccc gtgtaccctc agcctcccag
     1021 ttaccagcct tcggattatg gcatcacggt tccttctgag cagcttcaag ggaatccgct
     1081 gccaatgatg tcgcaggagg attccccgtt tcccacgtgg gagccctgga atcccagcta
     1141 tccattgtca gttccacacc tacttcctgg ctttgtccca ggagacgcca acctccagca
     1201 gccatggtca acctgtgatt tacaccaaga tccccaatga agagaagtgg ggattcccta
     1261 tgtattccct gtaaacctca ggatcatgca gtattgtgga cttaggcatc tttctctacc
     1321 tcctaagaga agaaaatgtg gaatcaaacg aaggtccatg aagaaccccc ccccgtgcct
     1381 catccttgtt gtttcaatgg ggtccataag gaaagagggg cagtggattg ttatttgagg
     1441 ttcattccct ggtcccctgc gacttacctc ctgtctatct ccatctgact tccgccatgg
     1501 agtctcctct cccacaagag gaacctgtgc ctccatagac acctgctcac gccttcttct
     1561 ttctctaacc cacttgttac agaatccttg tccagtgttt cacagtccca aagtctctac
     1621 catgcaagcg gaatgcctgg agctacagat ggacctgagc agccaagcaa tcacttagca
     1681 agtacacaga ctttggttca tctatagcaa tgaaaaaaat aattgaggat ctagtcttac
     1741 atcggacgta tttgtaagat aatgaagaaa caaaaacaaa gtggtggctt gagattgtgc
     1801 tccgtattgt cgcagacttc gccattggtt cacagctggt ggcagtattt gttgagatca
     1861 gggtgccttg ggcttcttgc aggaattagg ttactagtgc tagttactag tactttgagg
     1921 gttcgaaggc ccccactggt cctcttggtt gggtggttgg ttagttggtt ggttggttgg
     1981 ttggttttaa catggcactc attgccttag ctctccacct gttggttcac tcacccttcc
     2041 atggccgcca tttgcttgtt gttccctccg ccttatgttc tgctggccta gaccaggaag
     2101 ccaaagaggt tagagtgtcc accaggtata agtaatgagc aaaggacgtt tgcatgtctt
     2161 aacccatcat cgtagttcct gtggtaaagg gaacatctca ggatatgaag gcaaattaaa
     2221 gcactttctt atggctggaa ataatcctac cacataagca gaatctgaaa taacattcaa
     2281 gggttttcta attaactgta atataggagt caaaatagcc atatatacct gtttggctaa
     2341 aaaatgaagt attaaaagat tagttaatat ccaggcctgg aatccatcct gcaccattag
     2401 atgagccatc aatacattac ataaatacct ttggaatggg attatgttgg acaatttatt
     2461 aatcataaat tgagttcata taagaaaaat tccataactt acccactgaa atataatttc
     2521 ttattctaca aaaatctaca aatgagatgt aaaaatacat tgagtttggt gatgctctta
     2581 aaaatgattg ctggctaatg gtaatgtaat tgttgacatt gggtcgtccc cccatttact
     2641 aattaagcaa gagtaaggta agcagttaat gtttgatggc ccttatagtc taaataaatc
     2701 cattccaaag gtttatcctt ttgtgctaaa atagctgtag aagccaggtg agagggggaa
     2761 attggtaagt ttaaaggaag tgtccactgg atacacaaat gtctctttta gtcaggattg
     2821 aaatgcctat agttcttttc ttgtctctta agatactatg taaagactgt ccaacgcatt
     2881 aggtattcct aaggcgtacc ttaggcattc ctaaggtagg atgtagccaa ttaatactgc
     2941 ctaataatgt ctgaaagtgt caagtgtttt taacttgcct tgtgtaatga acatctcatt
     3001 gtgcttttac agttgttgta gttactagtt gccccagata atgcagagtc tgatctttgt
     3061 gcattttcag ctcattttta catagcctat ctggagtgag tcctgtcata tatggactgt
     3121 agctcttcct cttttgaagg tgcctaacag gataacagcc ataaaataaa taacataagg
     3181 ctgaggcaag gcctgtctca caggctctaa aaccttccct gcatggcatt aacacagagt
     3241 aggggagttg acctgccttg aggtgattca gttctttcat atcagagctc aggtgcttta
     3301 ggattgagaa aggaaataga aaatgctggg gcccctcatc atcggggtga atatctatag
     3361 ttgaaagcag tctgttaaat tcaaaactat taaaggccaa gctttaagaa tagctgtggg
     3421 tgtaagtgaa ccaggctgta aagtccccat ggaccacatg gtggcattaa tagttctcaa
     3481 atcaatcaac aatcttcatt tacccagatt tcttttgaat tacataacaa ggagaattcc
     3541 ggagaggaaa aggaggttct atatgctcat gttccagcta ttcttagact aactgctgaa
     3601 gagcctgtaa ccttttcttt tacagggggc tattggatgt ccagtagctt ctggatttcc
     3661 atgcagtttt tacatatggt atttttcagt ggcctctgaa taacccaatc catgttgatg
     3721 attttgtcct tgtggcaata ttggttcaat aatccctagt gagtcttttc caatttcttt
     3781 cctttttgat atcccatact ttgtatttgc cacttcccct gtgaagaatg ggtgccatta
     3841 taggtacgaa tatagatctc tgcattagtt tgttgtagaa tgtctattcc ccaaagatta
     3901 atcagaacat gagaaaccta agggtgtcat taggccttct ggacctatac attgtaattt
     3961 tgtagcactt tgtttaatct cattagacct catagttccc aatcctacca gtatcgaatt
     4021 tccctccata ataggacatg tgggcagcca ttcttctatg gttattttag atgcatcagc
     4081 catagaatta atcaatactg caaaatttgt tctctcattt ttagaaaata attaaattat
     4141 acttcctgat cgaagtttcg cttcaaacct ctatgcccag tctcctccat tccccttccc
     4201 ccatccagtc ctcctctgtt cccgttcaga aatgggagcg gcttcccatg ggtagcaagt
     4261 tgcattaagg ctaggcgccg ccattctcct attaaggcta gaagaggaaa gccataggag
     4321 gaaaagggcc tcaaggcagg cacagaatta gaaatagctc ctgttcctga tgttaggagt
     4381 tccacatgac gaccaagcta taaaactaca acatatactc agagggccta ggtcacgtag
     4441 gcttcctggt tggcagttca gtctctgagt ccctatgagc ccaggttagt tgattctgtg
     4501 gattttcttg tagtattctt ggccccctct ggctcctgca gtccttcatc ccctgcttcc
     4561 aaagggttcc ccaagctctg cctgatgttc agctgtgact ctctgtgtct gtttctatca
     4621 gttgctctcc gatgacagtt gggctaggca ctagtcaatg agtatagcag aataacatta
     4681 agaatcattc tgttgacttt tttttttttt tttttttttt ttttgggcca gggatgtttg
     4741 gttctccttt ccaggctttg gatccttggc cctgcaggcg gtgtcagggg taggctgcct
     4801 ctcatgacat ggatctcaag ctggacccat gattggttgt cccttcccac aatttctgca
     4861 ccacttttac cccagcatat cttgtaaact tttgtagctg gattggtgtc ccactccctc
     4921 tgctggaaag tcttgtctgg ttacaggaga tggctggttc aggcttcata tcctccattg
     4981 ctaagagtct tagctagggt caccctcata gattcctggg agtttccatt gcattaggtt
     5041 gctagcccat cctagagatg ttccctggtt ctagttatct ctcccagtac tctttccctc
     5101 caaccttccc cccacctgat ccttcctgtc caaaccccat ccccaccacc cattcagttc
     5161 cctccctcca tctaaccctt ctcagtgaga tttgtgcatc ccccccaccc ctggccccag
     5221 ccttgagccc tccttgttcc ttagcttctt gggttcgtgg attgtagcat gcttatcttt
     5281 tactttatcg cttatatcta cttagaagtg agtatagacc atatttgtct ttctgggtct
     5341 gggatatctt actcgggatg atctttccca cttctgtcca tttgtgtgca aatttcctga
     5401 tgttgttggt tggttttttt taaagaacta tcttttccca catttttatt agatattttc
     5461 ttcatttaca tttcatatgc tatcccaaaa gtcccctata ccctcccccc gccctgctcc
     5521 cctacccacc cactcccact tcttggccct ggcgttcccc tgtactggga catataaagc
     5581 ttgctagacc aaggggcctc tcttcccaat gatggccgat gaggccatct tctgctacat
     5641 atgcagctag agacaggagc tctggggata ctggttagtt catattgttg ttccacctaa
     5701 gggttgcata ccccttcagc tcttaggtac tttctctagc tcctatattg ggggtcctgt
     5761 gttccatcct atagatgact gtgagcatct acttctgtat ttgccaggca ccggcgatgt
     5821 tgttgttttt taacagttga ataatactcc attgtgtaaa catacatttt ctttatccat
     5881 tctttggttg aggggcatct aggttgtttc tagtgtctat tacaaataaa gctactataa
     5941 atgtaattga gcaagtgttc ttgtgatgtg gttgaaagtt ctttggatat ataccagatg
     6001 atatagctgg gtcttgaggt agattgatgt ccaattttct gaataaaaaa aaatcacatt
     6061 gctttctaa
//
