LOCUS       NM_145609               2846 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus Myb/SANT-like DNA-binding domain containing 4 with
            coiled-coils (Msantd4), mRNA.
ACCESSION   NM_145609 XM_006509891
VERSION     NM_145609.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BQ552041.1, AK032884.1, CT030685.6 and AI851587.1.
            
            On or before Sep 28, 2017 this sequence version replaced
            XM_006509891.3, NM_145609.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK132023.1, AK032884.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BQ552041.1         1-10
            11-1597             AK032884.1         2-1588
            1598-2447           CT030685.6         114152-115001       c
            2448-2846           AI851587.1         1-399               c
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 2.46 cM"
     gene            1..2846
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="Myb/SANT-like DNA-binding domain containing 4 with
                     coiled-coils"
                     /db_xref="GeneID:78100"
                     /db_xref="MGI:MGI:1925350"
     exon            1..72
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /inference="alignment:Splign:2.1.0"
     exon            73..678
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /inference="alignment:Splign:2.1.0"
     exon            679..2830
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2629..2634
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="hexamer: AATACA"
     polyA_site      2654
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="major polyA site"
     regulatory      2784..2789
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="hexamer: ATTAAA"
     regulatory      2805..2810
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="hexamer: AATAAA"
     polyA_site      2810
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
                     /note="major polyA site"
     polyA_site      2830
                     /gene="Msantd4"
                     /gene_synonym="8430410K20Rik; Mysantd4"
ORIGIN      
        1 cggggactcc atgaagcatc tcttttccag caccctcagg ggcgatccga cagaggtgcc
       61 ccggggtcgc aggtatctag ccagcttcca ggaccaggtg attggaaacc tcagtgattt
      121 gaactaagag ccaacaaagc cttgggtttg tggcacactc ttcacattct ttgcacagct
      181 ctttttgctg ttaaaatctg cactggattt ttaaaaatga agcaattgaa aagaaaaagg
      241 aaaagcaatt ttagtgttca ggagactcag acccttttaa aagaaattac caagaggaag
      301 gaagtcattt tttccaagca gctcaacaca acaataaacg tgatgaagcg aatggcctgg
      361 gaggagatcg cacagtgtgt gaatgctgtc ggagaaggag agcagaggac aggcacagag
      421 gttaagagac gttacctgga ctggcgcgca ctcatgaaaa ggaagaggat gaaggccaac
      481 atgaagctcg ttggttctgg gtttcctctg cccacgtctg atctagatga ctctctcact
      541 gaagacatag atgaaaaaat tgccttccga aatgatgcaa attttgagtg gcagaatgtg
      601 gcagatttcc gggatgcagg tggatcctta acagaggtca aagtggaaga ggaagaaagg
      661 gatcctcaga gcccagaatt tgagattgag gaggaggaag agatgctgtc atctgtcata
      721 ccagattcca ggagggaaaa cgagctccct gacttccctc acattgatga gtttttcacc
      781 ctcaattcca caccatccag acccacctat gatgagcccc atctgctcat gaacatagag
      841 aaacagaagc tggagctgga aaaacgccga cttgatattg aggcggaaag gctgcaggtg
      901 gaaaaggagc ggctgcagat agagaaagag cgcctgcgcc acctggacct ggagcacgag
      961 cgcttacagc tggagaagga gaggctgcag atcgagagag aaaagtggag gctgcagctg
     1021 gtcagcaccg agaaaccggc tctagagaac gagctgggcc agggcgagaa gtccatgctg
     1081 cagccacagg acatcgaagc agagaagctg aaacttgagc gcgaacgtct acagctggaa
     1141 aaagatcggc tgcaattttt gaagtttgaa tcagagaagc tgcagataga aaaggagcgc
     1201 ttgcaggtgg agaaggagag actgcggatt cagaaagaag ggcatttgcc ttgactgttc
     1261 ttgttcctgg gcttagcaaa caatgaggaa ttgtagcttt ccccctcagt tcatgcaaag
     1321 gtggtcctgg attagctacc ccatcaccac ccctgtttaa tgtcagtgtt tttagtagga
     1381 aaaagatagg aatacattgg tagctgtgtg ctgcagtagt gtactatata aatgctctgc
     1441 ccaacacaaa cagaatagca gaggatctga taggcacttc cacattagta atactgcata
     1501 gagccctgtc ttatttgtgc accccaagtt tacaatgatg tctgtagtaa agtttctatc
     1561 cagtgattct ccagtggagt ttgggctccc agaagacatt tgggactatg ggatgttatt
     1621 tggtggtcaa agtaaatggg tgtaggatgc taccagcctc aggagaggct tcaccatgtt
     1681 tagcatagtt gtcttcacaa gaaagaatta cccagtccaa gatgtcatta gtgccaagtt
     1741 tgaaaaactg tacacttggc ctaactgtgc atctttatag ctatgttcta tagttttaga
     1801 atattaaaac tttagatatt tatgtggtta gatacttaaa cggccaaaac cattttaact
     1861 gtgagacatt actatgtagt atgttgaata tagggagtgg tggagattgt aggtccgtta
     1921 ttcaaatggt attttctatc aatagactga gacttagaaa cctgggagca tctgagattg
     1981 tttaaaatgt gtcattttga aaggcagttg ccttcaagaa tcaacacatg actggaaagc
     2041 tttagttctc ccttctttga agctgttgtc atagttttta tacagaacta accatttcag
     2101 tcatgtactg aaatgttatg taagagaatg atagaagcta gtaaaaatgg taccagtgcc
     2161 aaaaaggtaa cagaaatcca tgatgtggaa cccaatgaat tgtcgattga tttctaagtg
     2221 aagaatagtc atttgagact gagagatggg ggaaatatcc tctgcatcag tgacagtggt
     2281 gttgaaatga tagtagtaac tgtgttattg ttagggaaga tcttgcttaa cttaaaatct
     2341 acaggagtct gtgaaaaggt accttctgac tccagaatct gaaattcaga gaaatcctgc
     2401 agaaagtaaa cggctgatac tttatatagc attgtgtttt tatctttacc ccttcaggat
     2461 ggctaaacct gggaattcta aatgcaaagg gcagacttcg cctgctgatt tgcccacagt
     2521 gtcctgattg tggtttattt cagtagtgta ctttctcatg cacaacaaag ttgcaagtgg
     2581 ttgcacgaat tcactttgtg ttttctgttt tctggggctg atagctttaa tacaacactt
     2641 ctgttgacac actatcttga ttctgtattc tttgttaatt taagaatggc tagaaaccat
     2701 gattgaatat aggtatgcaa agggaaatta tacacatgat tacttactct gattttgaca
     2761 tagtgttatt tttttataat tctattaaat acttctacct tagaaataaa ttttcctgtc
     2821 tgaaagttta aaaaaaaaaa aaaaaa
//
