LOCUS       NM_029499               1723 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus membrane-spanning 4-domains, subfamily A, member 4C
            (Ms4a4c), mRNA.
ACCESSION   NM_029499
VERSION     NM_029499.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Tang T, Li L, Tang J, Li Y, Lin WY, Martin F, Grant D, Solloway M,
            Parker L, Ye W, Forrest W, Ghilardi N, Oravecz T, Platt KA, Rice
            DS, Hansen GM, Abuin A, Eberhart DE, Godowski P, Holt KH, Peterson
            A, Zambrowicz BP and de Sauvage FJ.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Liang Y and Tedder TF.
  TITLE     Identification of a CD20-, FcepsilonRIbeta-, and HTm4-related gene
            family: sixteen new MS4A family members expressed in human and
            mouse
  JOURNAL   Genomics 72 (2), 119-127 (2001)
   PUBMED   11401424
REFERENCE   3  (bases 1 to 1723)
  AUTHORS   Ishibashi K, Suzuki M, Sasaki S and Imai M.
  TITLE     Identification of a new multigene four-transmembrane family (MS4A)
            related to CD20, HTm4 and beta subunit of the high-affinity IgE
            receptor
  JOURNAL   Gene 264 (1), 87-93 (2001)
   PUBMED   11245982
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125406.4 and AK151045.1.
            
            On Aug 14, 2009 this sequence version replaced NM_029499.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF237914.2, AK172650.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-7                 AC125406.4         100163-100169       c
            8-1105              AK151045.1         1-1098
            1106-1723           AC125406.4         80584-81201         c
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 8.44 cM"
     gene            1..1723
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     4C"
                     /db_xref="GeneID:64380"
                     /db_xref="MGI:MGI:1927656"
     exon            1..107
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     exon            108..267
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..813
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /note="membrane-spanning 4-domains, subfamily A, member 9"
                     /codon_start=1
                     /product="membrane-spanning 4-domains, subfamily A, member
                     4C"
                     /protein_id="NP_083775.1"
                     /db_xref="CCDS:CCDS29599.1"
                     /db_xref="GeneID:64380"
                     /db_xref="MGI:MGI:1927656"
                     /translation="MQGQEQTTMAVVPGGAPPSENSVMKSQMWNENKEKFLKGEPKVL
                     GVVQVMIALINLSFGIIILANLSSEPLISVVLMAPIWGPIMFIVSGSLSIAAGVKPTK
                     SLIISSLTLNTITSVLAATASIMGVVSVAVGSQFPFRYNYTITKGLDILMLILNMLEF
                     CIAVSISAFGCKASCCNSSEVLVVLPSNPAVTVMAPPVTLQPLPPSEHQGKNVPENVY
                     KNHSEEIV"
     exon            268..387
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     exon            388..444
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     exon            445..570
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     exon            571..672
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
     exon            673..1723
                     /gene="Ms4a4c"
                     /gene_synonym="5830413L19Rik; Ms4a9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attaaccagt ctgctatcta caaaggggga acagagtcct gtgagaacac acaatcaaaa
       61 cttctcctgg aataaatcat ctgacatcag atccttccca ttgtctgtac tgtttctgct
      121 gccctggaaa ccatgcaagg acaggaacag accaccatgg cagtggttcc tggaggtgct
      181 ccaccttcag agaattctgt tatgaaatca caaatgtgga acgagaacaa ggagaaattc
      241 ttgaaggggg aacccaaagt ccttggggtt gtacaagtta tgattgctct cataaacctc
      301 agcttcggaa taataatttt ggcaaatcta tcttctgaac cactcatttc tgtggtctta
      361 atggctccaa tttggggacc aataatgttc attgtctcag gatccctgtc aattgcagca
      421 ggagtgaaac ctacaaaaag cctgatcatc agcagtctaa ctctgaacac tatcacctct
      481 gtgttggctg caactgcaag cataatgggt gtagtcagtg tggctgtggg ttcacagttt
      541 ccgtttcggt ataattatac aatcaccaag ggtttggata ttttgatgtt aattttaaat
      601 atgctagaat tctgcattgc tgtgtccatc tctgcttttg gatgtaaagc ttcctgttgt
      661 aactccagcg aggttcttgt agtgctacca tcaaatcctg ctgtgactgt gatggcaccc
      721 cctgtgacgc ttcaaccatt gccaccatca gaacaccaag ggaaaaatgt tccagaaaat
      781 gtatataaga accactcaga agaaatagtc taattttctt gtgtgtatgt gaatgtgtgt
      841 gtgtgtgtgt gtgtgtgtgt gtatgcattt ccctgggaaa ttaacacttc attgccctgg
      901 cttttggggg gaatatcaga catgccataa ctttgtaaat ctaacatcta ctagtacaac
      961 aacactttaa catcctccat taattgtatg tacaaggggc aatgaattag caaagatgtt
     1021 ttgaaagcaa aatgaaacaa acaaacaagc cagcacacaa aaaaagacct gttttgtctt
     1081 ttgcaaagat taaagaaagg cgttcacatt tctttggggc ttttgctaaa taagtggatt
     1141 tagctgcttt tgatcatgta caaacacatg aattatgtat attatattac taatgatagg
     1201 aaccaatttt tatctctgtg catattcatc atataataac atactctata ctgtaattga
     1261 tatggtaaaa attataataa agagaagtga ctgaaatcag aatacacaaa cacacacaca
     1321 cacacacatt tacatacata gtgtatatct ctgtatatac atagtacgtg tatggtgtgc
     1381 atgtagagat tatagaaggt atacatacac atatgtgtac atattacata tgacctaaaa
     1441 aatcacttat aactgtggtt tggtgctgta atctccccta aggctcacat ctttgaacag
     1501 ttggtcccaa gtagtgccat tattttgaaa gattgctgaa tctttcagat atgtggccta
     1561 acttgtgaaa ctaaatcact aaaggttggc tttgaaggtg acactgcctt ccagttgatt
     1621 gttcacattg actttcaagt taaaagcaaa atccaaagtg tctgtttatt aggctaaatt
     1681 tccccaaaag acataattgc cagtaaattc ttagataaat tga
//
