LOCUS       NM_027058               1194 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus membrane-spanning 4-domains, subfamily A, member 20
            (Ms4a20), mRNA.
ACCESSION   NM_027058
VERSION     NM_027058.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1194)
  AUTHORS   Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V,
            Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs
            P, Fu J, Nefedov M, de Jong PJ, Stewart AF and Bradley A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU938748.1 and AK006056.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006056.1, SRR5189685.81379.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-553               BU938748.1         4-556
            554-1102            AK006056.1         560-1108
            1103-1194           AK006056.1         1110-1201
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 7.68 cM"
     gene            1..1194
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     20"
                     /db_xref="GeneID:69369"
                     /db_xref="MGI:MGI:1916619"
     exon            1..393
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            394..503
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             444..1073
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /codon_start=1
                     /product="uncharacterized protein LOC69369"
                     /protein_id="NP_081334.1"
                     /db_xref="CCDS:CCDS50393.1"
                     /db_xref="GeneID:69369"
                     /db_xref="MGI:MGI:1916619"
                     /translation="MSINEVSTFYIIKEDTIAMGGAQIMLGLIHNALGTLWLSLHNLE
                     DKRYSIGHKLMLASICYLFVSGTFFINSGSSSITQGISSVFQHMFAIITNIISIFVAI
                     FGLILLGYEFPIFESIGTEYIWSNMAGMMLLQISVMCAITELVIAILVLHWFITAHKI
                     EEPSEEIFSGPSHSHLSSPPSTQPSMLELENVSEQSHPKDIEDENDVTN"
     exon            504..647
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            648..701
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            702..821
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            822..942
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1194
                     /gene="Ms4a20"
                     /gene_synonym="1700017D01Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acccttggta accacgttct tgaccacaac cgcagcttta gatcctcgcg agtagggaat
       61 gaaggggtac cacacaggag gcagcgccca ctgggctcca ctggatgcca ggttgcccac
      121 cagaccacat cactctggcc ctgggctcag ggcatgatgt gagtgtgaga gctttggccc
      181 ggttgccatt aagactcact ccaggtcaca ctgagggcaa gggttgctag tccctggccg
      241 ctgggactct ctcatcctga gttctcccat caccatcact aagaatgttt ttctggtaac
      301 cgaagttgaa ttgagacatc caaggtcatc tatgcatttg gacaagattc agacatctag
      361 gcggcttgtc cggctttacc ggggagaatc taaaaaagaa gcacattcat cctccattat
      421 tttgatgtca tatctaagac aaaatgtcaa taaatgaagt atcaacattc tatatcataa
      481 aagaagatac aattgcaatg ggaggtgcac aaataatgct tggcctaatt cacaatgcac
      541 tggggactct ctggctctct ttgcacaatc tagaagacaa gagatatagc atcggccata
      601 aacttatgtt agctagtatc tgctacctgt ttgtgtctgg aacatttttc atcaactcag
      661 gatccagcag tataactcag ggtatttctt cagtatttca gcatatgttt gcaattataa
      721 caaacatcat aagtatcttc gtggctatat ttggtttaat tctacttgga tatgaatttc
      781 caatttttga atcaatagga actgaataca tttggtcaaa tatggctggc atgatgcttc
      841 tacaaatttc tgtcatgtgt gccatcacag agctggttat tgcaatccta gtgctgcact
      901 ggttcataac agcacataaa attgaagaac cctcagaaga aattttctca ggtccctccc
      961 attcacacct atcatcacca ccttcaacac agccatctat gcttgagttg gagaatgtct
     1021 ctgaacaatc ccatccaaaa gatatagaag atgaaaatga tgtgactaac tgaagaaccc
     1081 tgcagggttt tttttttttt ttacaagatg cctcatggga aacatactcc aatgatgtcc
     1141 ttgccagttc tcactgtctc ctcattctgt aataaaggat gcaatctgat cacc
//
