LOCUS       NM_001034898            1713 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus membrane-spanning 4-domains, subfamily A, member 15
            (Ms4a15), transcript variant 1, mRNA.
ACCESSION   NM_001034898 XM_619573 XM_908520
VERSION     NM_001034898.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 1713)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK143446.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001034898.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK143446.1, BC147202.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1713              AK143446.1         2-1714
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 7.47 cM"
     gene            1..1713
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     15"
                     /db_xref="GeneID:545279"
                     /db_xref="MGI:MGI:3617853"
     exon            1..132
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..811
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     15 isoform 1"
                     /protein_id="NP_001030070.1"
                     /db_xref="CCDS:CCDS29594.1"
                     /db_xref="GeneID:545279"
                     /db_xref="MGI:MGI:3617853"
                     /translation="MWERRGRGESAAGTAAVASRNASGLRPPPAILPTSMCQPPGIMQ
                     FEESQLGAQAPRATQPPDLRPMETFLTGEPKALGTVQILIGLIHLGFGSVLLMVRRGH
                     LGMLFIEGGVPFWGGACFIISGSLSVAAERNHTSCLLKSSLGTNILSAMAAFAGTAIL
                     LMDFGVTNWDVGRGYLAVLTIFTILEFFIAVIATHFGCQATRAQTNASVIFLPNAFGT
                     DFNIPSPAVSPPPAYDNVAYMPKESSE"
     exon            133..307
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     exon            308..430
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     exon            431..487
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     exon            488..580
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     exon            581..694
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     exon            695..1713
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1713
                     /gene="Ms4a15"
                     /gene_synonym="E530011F12Rik; Gm1286"
                     /note="putative"
ORIGIN      
        1 cagaggcgca gctcctaagc agtgatttcc aagccccaca caaatagcaa ggttttcaca
       61 ggatgatgtg tgaatgtggg agcgcagagg cagaggggag tcagcagccg gtacagcagc
      121 cgtggcaagc cgcaacgcca gcggcctccg cccacctcca gccattctgc ccacctccat
      181 gtgccagcct ccagggatca tgcagttcga agagtcacag ctgggggcgc aggcgcccag
      241 agctactcaa ccacctgatc ttagaccaat ggagacgttc ttgaccggag aacccaaagc
      301 tttagggacg gtgcagatcc tgatcggtct catccacctt ggcttcggca gcgtcctgct
      361 tatggttcgg cgaggccacc tggggatgct cttcatcgaa ggtggcgtcc ccttctgggg
      421 aggagcttgt tttatcatct ctgggtccct ctccgtagca gctgagagga accacaccag
      481 ttgcctgttg aagagcagtc tgggaaccaa catcctcagt gccatggcag ccttcgcggg
      541 gacagccatt cttctcatgg actttggtgt cactaactgg gatgtgggca ggggctacct
      601 tgccgtgttg accatcttca ccatcctgga gttcttcatc gctgtcattg ccacccactt
      661 tgggtgccaa gccacccgtg ctcaaactaa cgcatctgtg attttcctac ccaatgcctt
      721 tggcacggat ttcaacatcc ccagcccagc agtctctcca cctcctgcct atgacaacgt
      781 ggcatatatg cccaaggagt catcagaata gattacaagt tctgcaggtt gaagtccagg
      841 cttcccactt tacccagagc ctctccaccc tcactttgtc cgttctaagg cagcggtttc
      901 ccagcgagac tctccaagcc atgtgcactg tgtcactgag tgacatgttc catccatttc
      961 ctagttcctc caatactgtc tttccaaaaa aggcataaag ctggtgtcca gggtgtgccc
     1021 attctcagcc ctgtcacctg acatagacgt cccgtacact cctcctcagt cctctgctca
     1081 tcgtgggaaa tcttggcttc gcagaggttt cggaggtttg tcttcaagat cattaagcac
     1141 ggagaactca gaatgttcca gaatagactg gcatttcaga ggctcagagc aaggcttgac
     1201 ctccaggctc ctagctccga agatcagctc tgtcctttgt catctgctgt tacatctttg
     1261 ggatttcatt ttcccacccg gaaactagag tgttaaacta caccacataa gactaaggcg
     1321 tgatggcgca cgcctttaat cccagcattt gggagattga ggccagcctg gtctacagag
     1381 tgagttccag gacaggacag tcagggctac acagagaaac cctgtctcga aaaccaaaaa
     1441 aaagcacctc ttggctaagc cctgcatttc tcttctccac cccggaacct ccttctcctt
     1501 atttgtaaca gaagattggc attgactctg gctctgccca cctactagga caggaggctg
     1561 cagaggagac tgaaccactc catactcccc caaccctgcc tgaaaagcag gagtgcccct
     1621 gagagtcacc acttcagccc agtgttcaca ggccctgaca tatggcttgt atcatctata
     1681 ctttggagaa aaataaacag cgtggcttag att
//
