LOCUS       NM_001347435            1301 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus membrane-spanning 4-domains, subfamily A, member 13
            (Ms4a13), transcript variant 2, mRNA.
ACCESSION   NM_001347435 XM_006527380
VERSION     NM_001347435.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK006841.1 and AF544402.1.
            
            On Nov 26, 2016 this sequence version replaced XM_006527380.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006841.1, AF544402.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 AK006841.1         2-10
            10-831              AF544402.1         1-822
            832-1301            AK006841.1         834-1303
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 7.92 cM"
     gene            1..1301
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     13"
                     /db_xref="GeneID:73466"
                     /db_xref="MGI:MGI:1920716"
     exon            1..193
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     exon            194..309
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     CDS             259..783
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /note="isoform 2 is encoded by transcript variant 2;
                     testis-expressed transmembrane 4; testis-expressed
                     transmembrane protein 4.2"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     13 isoform 2"
                     /protein_id="NP_001334364.1"
                     /db_xref="CCDS:CCDS84420.1"
                     /db_xref="GeneID:73466"
                     /db_xref="MGI:MGI:1920716"
                     /translation="MECRNPKVSSANITVLGVIQIMIGIYHVLMWYFLLLLYMGQIKG
                     VFGTYEPVTYKMGTSLWGFAFVISGAFTVKAAKYQSRHMILCTMSLNILCIIITIVAA
                     SLTIVELSHFRSVSYRNYGQAKLGREVSRVLLCSYPLEFAIALLYSISSCAYLAGNQE
                     ETLESVTEVVEGNS"
     exon            310..450
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     exon            451..507
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     exon            508..627
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     exon            628..723
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
     exon            724..1301
                     /gene="Ms4a13"
                     /gene_synonym="1700060E18Rik; Tetm4.2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccttgaca acccggcggc ttgaggagct tgacaaccac ctgggagcta gactgcgcgc
       61 tgctgcctct gatggctatg cagccagatc tagcgctgag agcaccatcc acggtgatcc
      121 ttctcttcag cctgtgccta ggcctgatag ggtgaaactg gatccttggg tcttgggaca
      181 actgaaatgt gagaagtttg ataataaaga tatccccgaa gattagaaac aaaatcaacc
      241 agaggaaatt ctgaaagtat ggaatgtaga aatccaaaag tatcttcagc aaatattact
      301 gttttagggg ttatccagat tatgattgga atctatcatg tactcatgtg gtatttccta
      361 ttgctgttgt atatgggaca aattaaagga gtatttggaa catatgaacc tgtaacttac
      421 aaaatgggaa cttctttatg gggatttgct tttgtcattt caggggcctt cactgtaaaa
      481 gcagcaaaat atcaaagtag acatatgatt ctctgtacta tgtccctgaa catactctgc
      541 ataattatta cgatcgttgc agccagccta acaatagtgg aattgtctca tttccgttcg
      601 gtgtcatata gaaattatgg acaagcaaag ctgggaaggg aagtgtcccg tgttttgttg
      661 tgctcctacc ccctggaatt cgccattgcc ctcttgtact caatctctag ttgtgcatat
      721 ttggccggaa accaagagga aactttagaa agtgttactg aagtagtgga aggcaactcc
      781 tgaaagctga agacatgagc aactttcatg gctgctaaca cctgatgtag gtgcccatga
      841 gattcccata taacaaggca cacctcatgc attttgtgca aaaggaaatt cacaacaagg
      901 tgaaagttat cccttggtat ttagggagtg tctacataca gatattctag gttccagagg
      961 gaaaagcttt tcctatgtaa gtatgagacc atcgcaagaa agcatttgct agctagccac
     1021 tccaaagaga tgtcaactct ccccagcaga tcatctgccg ttgaccagaa aaaccacttg
     1081 taatctgtag aatgcaggct atgagattta gagcacaatg tgtaactcag aggaaatttt
     1141 taatttcttt ccctgtaagt gaaaagcaca ttccacgttc tgcattcttc tgctcaagct
     1201 agcttctacc tccacaaagc gaggctcaaa tggtcaccaa tgtagtgcct ttattgtccc
     1261 aaggcttttc ctgacctcat taaagttcct ttctgccctg c
//
