LOCUS       NM_023529               1045 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus membrane-spanning 4-domains, subfamily A, member 10
            (Ms4a10), transcript variant 1, mRNA.
ACCESSION   NM_023529
VERSION     NM_023529.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
REFERENCE   3  (bases 1 to 1045)
  AUTHORS   Liang,Y. and Tedder,T.F.
  TITLE     Identification of a CD20-, FcepsilonRIbeta-, and HTm4-related gene
            family: sixteen new MS4A family members expressed in human and
            mouse
  JOURNAL   Genomics 72 (2), 119-127 (2001)
   PUBMED   11401424
REFERENCE   4  (bases 1 to 1045)
  AUTHORS   Ishibashi,K., Suzuki,M., Sasaki,S. and Imai,M.
  TITLE     Identification of a new multigene four-transmembrane family (MS4A)
            related to CD20, HTm4 and beta subunit of the high-affinity IgE
            receptor
  JOURNAL   Gene 264 (1), 87-93 (2001)
   PUBMED   11245982
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC148991.2 and AF237918.1.
            
            On Apr 7, 2020 this sequence version replaced NM_023529.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF237918.1, BC150675.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849376 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-30                AC148991.2         79639-79668
            31-1041             AF237918.1         1-1011
            1042-1045           AC148991.2         92047-92050
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 7.44 cM"
     gene            1..1045
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     10"
                     /db_xref="GeneID:69826"
                     /db_xref="MGI:MGI:1917076"
     exon            1..82
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            83..278
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..908
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     10 isoform 1"
                     /protein_id="NP_076018.2"
                     /db_xref="CCDS:CCDS37919.1"
                     /db_xref="GeneID:69826"
                     /db_xref="MGI:MGI:1917076"
                     /translation="MAGQAPTAVPGSVTGEVSRWQNLGPAQPAQKVAQPQNLVPDGHL
                     EKALEGSDLLQKLGGFHIAIAFAHLAFGGYLISTVKNLHLVVLKCWYPLWGTVSFLVA
                     GMAAMTTVTFPKTSLKVLCVIANVISLFCALAGFFVIAKDLFLEGPFPWPIWRPYPEP
                     TTYIQRLELTLFCFTFLEIFLSGSTAITAYRMKRLQAEDKDDTPFVPDTPMELKGLSL
                     GPPPSYKDVAQGHSSSDTGRALATSSGLLLASDSFHQALLHTGPRTLRK"
     exon            279..398
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            399..455
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            456..587
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            588..698
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            699..792
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            793..931
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1045
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1017..1022
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1045
                     /gene="Ms4a10"
                     /gene_synonym="2010001N17Rik"
                     /note="major polyA site"
ORIGIN      
        1 gatttccacc tctggctctg tgctgaggca gctctggatg gtcaggcaca gctgaagcct
       61 acaacagagt tcccggggcc agccagggtt cccggccagg gtcaatggct ggccaagctc
      121 ccacagcggt tcccggcagt gttactggag aagtctcacg atggcagaac ctaggacctg
      181 cccagcctgc acagaaagta gcccagcccc aaaacctggt tccagatggg caccttgaga
      241 aagccctgga gggaagtgac cttctacaga agttgggtgg ctttcacatc gccattgctt
      301 ttgcacactt ggcctttggt ggctacttga tctccacagt caagaatctg cacctggtgg
      361 tgttgaagtg ctggtatcca ctctggggaa ctgtctcttt tctcgttgca gggatggcgg
      421 ccatgacaac agtgacattc cctaagacct ctctgaaggt tctctgtgtg atagccaacg
      481 ttatcagctt gttctgcgca ctggccggct tctttgtcat tgccaaggac ctcttcctgg
      541 agggtccttt tccatggcca atctggagac cataccctga acccacaacc tacatccaaa
      601 ggctagagct gaccctgttc tgcttcacct tcctggagat cttcctgtcg gggtccacag
      661 ccatcacagc ctataggatg aaacgcctgc aagcagagga caaggatgac acccctttcg
      721 ttcctgacac acctatggaa cttaaaggtc tatcgctggg gccaccacca tcctataaag
      781 atgtggccca aggacactcc tcctctgata ctggcagagc cttggccacc agctctggac
      841 tgctgctggc ctctgactcc ttccatcaag ctctgcttca cacgggccca aggaccttga
      901 gaaagtagtc taagactact agactttccc aataaagact gagttcctgc aatgccaagt
      961 ccttccctgc ctcccattgg ctggactccg gtgatgacac aggcgtgact tgcacaaata
     1021 aatgcataac cactatgaaa agaaa
//
