LOCUS       NM_026422               2251 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosome recycling factor (Mrrf), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_026422 XM_982725 XM_993789
VERSION     NM_026422.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY320901.1, CX237338.1, AK010018.1 and BX293557.5.
            
            On Apr 25, 2009 this sequence version replaced NM_026422.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC019787.1, AK010018.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                BY320901.1         3-20
            19-269              CX237338.1         1-251
            270-1216            AK010018.1         1-947
            1217-2251           BX293557.5         53602-54636
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 24.19 cM"
     gene            1..2251
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /note="mitochondrial ribosome recycling factor"
                     /db_xref="GeneID:67871"
                     /db_xref="MGI:MGI:1915121"
     exon            1..302
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     exon            303..514
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     CDS             331..1119
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /note="ribosome-recycling factor, mitochondrial;
                     ribosome-releasing factor, mitochondrial"
                     /codon_start=1
                     /product="ribosome-recycling factor, mitochondrial
                     precursor"
                     /protein_id="NP_080698.1"
                     /db_xref="CCDS:CCDS38114.1"
                     /db_xref="GeneID:67871"
                     /db_xref="MGI:MGI:1915121"
                     /translation="MASGIRCFRLLHPAFRSYHAALTRPVSEVSMKTVSGRQHGHRQY
                     SAYPAVPVRHFATKKAKAKGKGQPQARVTVNRALVEDIISLEEVDEDMKSVVEALKDN
                     FNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIK
                     AIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVRTNAMNK
                     LKKSKDKTSEDTIRLIEKQISQMADDTVAELDQHLAAKTKELLG"
     exon            515..670
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     exon            671..789
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     exon            790..881
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     exon            882..1041
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..2251
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1532..1537
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /note="hexamer: AATAAA"
     polyA_site      1556
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /note="major polyA site"
     polyA_site      1898
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
     regulatory      2215..2220
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
                     /note="hexamer: AATAAA"
     polyA_site      2251
                     /gene="Mrrf"
                     /gene_synonym="2400002D02Rik; MRFF; MTRRF; RRF"
ORIGIN      
        1 ggggcggggc ctagaagcct gcgggtgagg atggttttcg ccaaggcccc gcggccagga
       61 tggcactgag cttcgggtac tcacctgcta gcctcagagc tgtgccctca gctcatgccc
      121 cgaaagcagc ttccgacgct ggggtccgag cgaaggacct gaggttacct ctgccgaaac
      181 accgctcgcc gcctggccgc ccgtgacgca ctacgcctgc gccgccgcgc tggcccgtga
      241 cgtcatgacg cccgcacctc cgctgtcccg cgtgtgtttc tctatagtcc cggccgtagc
      301 tgtggctgct tctgaggatt ctcttccgtc atggcctcgg gaataagatg ctttcgcctg
      361 ctgcaccctg cttttcgcag ttaccatgct gctttgacca gacctgtttc agaagtttcc
      421 atgaagacag tgagtggaag acaacatggc cataggcagt actcagccta cccagcagta
      481 ccagttcgcc attttgcaac caagaaagcc aaagctaaag ggaaaggaca gccccaggcc
      541 agggtgaccg ttaatagagc cttggtcgag gatatcatca gcttggaaga ggtggatgaa
      601 gacatgaaat ctgtggtgga agcacttaag gataatttca ataagactct caacataagg
      661 actgcaccag gatcccttga tcatattact gtggtaactg ctgatgggaa ggttgctcta
      721 aatcagattg gccagatctc catgaagtcg ccacaggtga ttctggtgaa tatggccagc
      781 ttcccagagt gtacagctgc agctatcaag gctataagag aaagtggaat gaatctgaac
      841 ccagaagtgg aaggaacact aattcgggta cccattccta aagtaaccag ggaacacaga
      901 gaaatgctgg taaaattggc caaacagaac accaacaagg ccaaagaaaa tttacggaag
      961 gttcgcacta atgcaatgaa taaactgaag aagtcaaagg acaaaacctc ggaggacacc
     1021 attagactca tcgagaagca gatcagccaa atggcagacg acacggtggc agagctggac
     1081 cagcatctgg cagcaaagac caaagaactc cttggatgaa agtcagcagt cacagccgga
     1141 caccgagtcc tgtgtctgct catgccgtgg gtggcaagct cgtgtctaca ctgccctgac
     1201 catgcacccg aggctgatac tgctgcgcct ccatcgtctg ctcagtctcc tgttgggatg
     1261 ctcagattta tggaatctct tccttgttcc cgtgcacagg cttgttctgc tctgaatctc
     1321 cccttgtgaa tgtctctgtt ggcagaggac ctttactctg gcagtgacct tgactgtggt
     1381 gtcaccacag cactagggcc gctgtcaggc ttagcagctc ctctcatcaa cacaggagcc
     1441 tcctttcaaa ctgtgaatca taccctgccc ttgtgttaaa ctcatttgga ttaatgtggg
     1501 ccttcagtct gactgctgat gatcaagcct aaataaattg gaaaataaca accacagaag
     1561 aaagatagag tggtttggat ggaagaaccc cagaacttgt ttataaagca accaagggca
     1621 gtttttgcct ctgggttgtc ctcccacatg ctgttcatgt gggccaagct tccgctccta
     1681 actagccctg tttactgtgc catcagttgc ccgctctggg cagtctctct gcctccagag
     1741 ctaggccccg gttttggctg ggctcctctt atttcatcct ctgtttttct tttctgttag
     1801 tctatatctt gagaaaaatt accagagaga atgacacaga gtaccgcttg aagttgtcca
     1861 tgtatttatg ttgtaaaaat tggtagctgc tcaccaaatg ctttccttct ctctctcatt
     1921 tcactcttgt ctctgtcagc atttacttgg taatgagcta ctgtttttcc agggcctgtc
     1981 tccctggccc ttgttttcct tttaattgtt gtgtgccatg ccatagcttt tgtatagatg
     2041 tcaggtcaga cctcgcccag ctcttgcacc atgtggggtc atggatggaa ctcgggttct
     2101 tgaacttgca ccaagtaccc tcacctgctg agtcacctcc cttgctgtac tgcggcttcc
     2161 atgccaagtt aggttagtct ttcccccttc tcctgcagtc attcattcaa ttataataaa
     2221 gctactttta ggcattattt gtaatcacaa a
//
