LOCUS       NM_021556               1590 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosomal protein S30 (Mrps30), mRNA.
ACCESSION   NM_021556
VERSION     NM_021556.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Cheong,A., Lingutla,R. and Mager,J.
  TITLE     Expression analysis of mammalian mitochondrial ribosomal protein
            genes
  JOURNAL   Gene Expr Patterns 38, 119147 (2020)
   PUBMED   32987154
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   3  (bases 1 to 1590)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   4  (bases 1 to 1590)
  AUTHORS   Huang,T.T., Naeemuddin,M., Elchuri,S., Yamaguchi,M., Kozy,H.M.,
            Carlson,E.J. and Epstein,C.J.
  TITLE     Genetic modifiers of the phenotype of mice deficient in
            mitochondrial superoxide dismutase
  JOURNAL   Hum Mol Genet 15 (7), 1187-1194 (2006)
   PUBMED   16497723
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK011476.1.
            
            On Apr 6, 2007 this sequence version replaced NM_021556.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK011476.1, AK151642.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1590              AK011476.1         3-1592
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 66.88 cM"
     gene            1..1590
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="mitochondrial ribosomal protein S30"
                     /db_xref="GeneID:59054"
                     /db_xref="MGI:MGI:1926237"
     exon            1..601
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..1347
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="28S ribosomal protein S30, mitochondrial; S30mt;
                     MRP-S30; programmed cell death 9"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL65"
                     /protein_id="NP_067531.1"
                     /db_xref="CCDS:CCDS26794.1"
                     /db_xref="GeneID:59054"
                     /db_xref="MGI:MGI:1926237"
                     /translation="MAAARYWKLVPRGRGLSQNAAAKASATAPEVRDLEVVATPVARY
                     PPIVASMTADSKAARQRRVQRWQATVHAAPSVDEKIRILTKMQFKKYVVHPQISALNA
                     DRWYQSFTKTVFVSGLPPAPALSPPPPSLDLAALRAAVCDCILQEQVYVRRRRPRSLF
                     DRRQALASSILDQVVRTLVNLLAPLNPVLSTAALDCKRSVDFYWLRGEERIPAGHRKG
                     HIDALRYQINDKPHNQIRISKQLPEFVPLDYSIPTEIPVMKCKPDKLPLFRRQYENSI
                     FTGSKTADPCCYGHTQFHLIPDRLKRERLIRQNQAEQVEAVFRANAIASLFAWTGAQA
                     MYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTVQADQNNPRKNLCWGSQS
                     QPLYETVEDNDVKGFDDGTLLQIVHFLLNKPREDGAQLLASQEKELDLGP"
     exon            602..747
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /inference="alignment:Splign:2.1.0"
     exon            748..853
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /inference="alignment:Splign:2.1.0"
     exon            854..1030
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..1590
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1374..1379
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="hexamer: AATAAA"
     polyA_site      1399
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
     regulatory      1409..1414
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="hexamer: ATTAAA"
     polyA_site      1436
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="major polyA site"
     regulatory      1458..1463
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="hexamer: ATTAAA"
     polyA_site      1480
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
                     /note="major polyA site"
     polyA_site      1582
                     /gene="Mrps30"
                     /gene_synonym="2610020A16Rik; PAP; Pdcd9"
ORIGIN      
        1 gggtcgcggc gggcgaaaat ggcggcggcc aggtattgga agctggtgcc ccgcggccgg
       61 ggattgtccc agaatgccgc tgctaaggcg tccgctacgg ccccggaggt gagagacctg
      121 gaggtcgtgg cgacgcccgt cgcgcggtac ccgccgatcg tggcttccat gaccgccgac
      181 agcaaagcgg cgcggcagcg gcgggtgcag cgctggcagg cgacggtgca cgcggccccc
      241 tcggtggacg agaagatacg gattctcacc aagatgcagt tcaagaagta cgtggtgcat
      301 ccgcagatct ccgccttgaa cgccgaccgc tggtaccaga gcttcaccaa gaccgtgttt
      361 gtctcgggcc tgccgcccgc cccggcgctg tcgccgccgc cgccctcgct cgacctcgcc
      421 gccctgcgcg ccgccgtgtg cgactgcatc ttgcaggagc aggtctacgt gcggcgccgc
      481 cggccccgct ccctcttcga tcgtcgccag gccctcgcct cctccatcct ggaccaggta
      541 gtgaggacgc tcgtgaacct gctcgctcca ctcaaccctg tcctgagcac tgccgctctc
      601 gattgtaaac gctctgttga cttttactgg ttgcgtggtg aagaacgcat tcctgctggt
      661 catcgaaaag gccatattga tgctttacga taccaaataa atgacaaacc acacaaccag
      721 attcgaatat ctaagcaact cccagagttt gtgccattgg attactccat ccctacagaa
      781 atccctgtga tgaaatgtaa accagacaag cttccattgt tcagacggca gtatgaaaac
      841 agtatattta ctggctcaaa aacagcagat ccatgctgtt atggccacac ccagttccat
      901 ctgatacctg acagactgaa gagagagaga ctgataagac agaaccaagc tgagcaggta
      961 gaagctgtct tcagagctaa tgccattgca agtctttttg cttggactgg agcacaagct
     1021 atgtaccaag ggttctggag cgaagcagat gttactcgac cttttgtctc ccaggctgtg
     1081 atcacagacg gaaaatactt ttcttttttc tgctaccagt taaatacttt ggcactgact
     1141 gtccaagctg atcaaaataa cccccgtaaa aatctatgtt gggggtcaca gagtcagcct
     1201 ctttatgaga ccgtggagga taatgatgtg aaaggctttg atgatggtac tctcctgcag
     1261 atagttcact ttctgctaaa taaaccaaga gaagacggag cacagctgtt ggcaagccag
     1321 gagaaggaac ttgatctggg accttgacga gatttaagtt tcaccagagg aacaataaaa
     1381 tcatttaaag attgtgtaac tgtctgctat taaacacatt ggtttttgaa aaaccagatt
     1441 tcttatgttg acctgtcatt aaaccttgca ttctggtcaa tttcttgact gaaagattta
     1501 gttttagatg taaagatggt gacctccaca catttgcttc cccaccccca ccccatatgt
     1561 gtctgtctct ctaaatatat gtttaaaaag
//
