LOCUS       NM_026080               1010 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosomal protein S24 (Mrps24),
            transcript variant 1, mRNA.
ACCESSION   NM_026080
VERSION     NM_026080.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Cheong,A., Lingutla,R. and Mager,J.
  TITLE     Expression analysis of mammalian mitochondrial ribosomal protein
            genes
  JOURNAL   Gene Expr Patterns 38, 119147 (2020)
   PUBMED   32987154
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   3  (bases 1 to 1010)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
REFERENCE   4  (bases 1 to 1010)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   5  (bases 1 to 1010)
  AUTHORS   Koc,E.C., Burkhart,W., Blackburn,K., Moseley,A., Koc,H. and
            Spremulli,L.L.
  TITLE     A proteomics approach to the identification of mammalian
            mitochondrial small subunit ribosomal proteins
  JOURNAL   J Biol Chem 275 (42), 32585-32591 (2000)
   PUBMED   10938081
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL627069.10, BY100364.1 and AK014099.1.
            
            On May 2, 2018 this sequence version replaced NM_026080.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK014099.1, AV504036.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 AL627069.10        12792-12793         c
            3-16                BY100364.1         4-17
            17-1009             AK014099.1         2-994
            1010-1010           AL627069.10        9074-9074           c
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 3.87 cM"
     gene            1..1010
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /note="mitochondrial ribosomal protein S24"
                     /db_xref="GeneID:64660"
                     /db_xref="MGI:MGI:1928142"
     exon            1..78
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..543
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /EC_number="3.6.5.3"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; 28S ribosomal protein S24, mitochondrial;
                     ribosomal protein, mitochondrial, S24; small ribosomal
                     subunit protein uS3m"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS3m isoform 1
                     precursor"
                     /protein_id="NP_080356.1"
                     /db_xref="CCDS:CCDS24402.1"
                     /db_xref="GeneID:64660"
                     /db_xref="MGI:MGI:1928142"
                     /translation="MAWSASVRGLGQRVLACSRELPGAWRTLHTSAVCAKNRAARVRV
                     AKGNKPVSYEEAHAPHYIAHRKGWLSLHTGNLDGEDHAAERTLEDVFLRKFMMGTFPG
                     CLADQIVLKRRANQVDICALVLRQLPAHKFYFLVGYSETLLSHFYKCPVRLHLQTVPS
                     KVVYKYI"
     exon            79..147
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /inference="alignment:Splign:2.1.0"
     exon            148..259
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /inference="alignment:Splign:2.1.0"
     exon            260..1010
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /inference="alignment:Splign:2.1.0"
     regulatory      644..649
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /note="hexamer: AATAAA"
     polyA_site      668
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /note="major polyA site"
     regulatory      800..805
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
                     /note="hexamer: ATTAAA"
     polyA_site      821
                     /gene="Mrps24"
                     /gene_synonym="3110030K20Rik; MRP-S24; Rpms24; S24mt"
ORIGIN      
        1 ggctgcgcac tgacgcgtcc cgggtcgcgc cggcccaaga tggcgtggtc cgcgtcggtg
       61 cgcgggctag ggcagcgggt gctggcctgc agccgggagc tgcctggcgc ctggcgcacc
      121 ctgcacacct ccgcggtctg cgccaagaat cgggcggcgc gagtccgcgt ggccaagggg
      181 aacaagccgg tgagctacga ggaggcgcac gccccgcact acatcgcaca ccgaaagggc
      241 tggctgtcgc tgcacacagg taacctggat ggagaagatc atgctgcaga gagaaccctg
      301 gaggatgttt tccttcgaaa gtttatgatg ggcacctttc ccggctgcct ggctgaccag
      361 attgttctga agcgccgggc caaccaagtg gacatctgtg ccctggtcct caggcagctg
      421 ccagcacaca aattctactt cctcgtgggc tacagtgaga ctctgttgtc acacttttac
      481 aagtgtcctg tgcgactcca cctgcaaact gtgccctcca aggtcgtgta caagtacata
      541 taaaaagtgc acttttctcc agtagagcct acaaggtcac agaggtgcag gagaccaaat
      601 gcctgttctc tgaggtggag gcgtcagctc caagctgctg ttgaataaaa ccctgatcat
      661 gttttgtccc tctgggtctc tctctctttc tttttttttt gagacagggt ttctctctat
      721 agccctggct gtcatggaac tcactttgta gaccaggctg gactggaact cagagacccg
      781 cctgcctctg ggtgctggga ttaaaggcgt gtgccaccac cgcctggcct ctcttggtct
      841 cttttaaaga ttttattttt aattatgcgt gggtgggtct gtctgtggat gggtctgtgt
      901 gtgtgtgtat gtgtgtgtgt gtgtgtgtgt gcacatgagt agaaggcatt ggatattcct
      961 ggagctggag ttacagttag cttttgtaaa tgaattaaac attcaacagg
//
