LOCUS       NM_025544                959 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosomal protein S15 (Mrps15), mRNA.
ACCESSION   NM_025544
VERSION     NM_025544.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 959)
  AUTHORS   Cheong,A., Lingutla,R. and Mager,J.
  TITLE     Expression analysis of mammalian mitochondrial ribosomal protein
            genes
  JOURNAL   Gene Expr Patterns 38, 119147 (2020)
   PUBMED   32987154
REFERENCE   2  (bases 1 to 959)
  AUTHORS   Shi,Z., Xu,S., Xing,S., Yao,K., Zhang,L., Xue,L., Zhou,P., Wang,M.,
            Yan,G., Yang,P., Liu,J., Hu,Z. and Lan,F.
  TITLE     Mettl17, a regulator of mitochondrial ribosomal RNA modifications,
            is required for the translation of mitochondrial coding genes
  JOURNAL   FASEB J 33 (11), 13040-13050 (2019)
   PUBMED   31487196
REFERENCE   3  (bases 1 to 959)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   4  (bases 1 to 959)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
REFERENCE   5  (bases 1 to 959)
  AUTHORS   Bogenhagen,D.F., Martin,D.W. and Koller,A.
  TITLE     Initial steps in RNA processing and ribosome assembly occur at
            mitochondrial DNA nucleoids
  JOURNAL   Cell Metab 19 (4), 618-629 (2014)
   PUBMED   24703694
REFERENCE   6  (bases 1 to 959)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   7  (bases 1 to 959)
  AUTHORS   Suzuki,T., Terasaki,M., Takemoto-Hori,C., Hanada,T., Ueda,T.,
            Wada,A. and Watanabe,K.
  TITLE     Proteomic analysis of the mammalian mitochondrial ribosome.
            Identification of protein components in the 28 S small subunit
  JOURNAL   J Biol Chem 276 (35), 33181-33195 (2001)
   PUBMED   11402041
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK050396.1, AK010330.1 and CF582282.1.
            
            On Jun 10, 2004 this sequence version replaced NM_025544.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI657767.1, AK050396.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               AK050396.1         5-107
            104-567             AK010330.1         67-530
            568-934             AK050396.1         572-938
            935-959             CF582282.1         2-26                c
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 59.8 cM"
     gene            1..959
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /note="mitochondrial ribosomal protein S15"
                     /db_xref="GeneID:66407"
                     /db_xref="MGI:MGI:1913657"
     exon            1..272
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            273..317
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            318..396
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            397..445
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            446..530
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            531..589
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            590..781
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     exon            782..938
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /inference="alignment:Splign:2.1.0"
     regulatory      918..923
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /note="hexamer: AATAAA"
     polyA_site      938
                     /gene="Mrps15"
                     /gene_synonym="1500003E24Rik; 2410002B11Rik; Mprs15"
                     /note="major polyA site"
ORIGIN      
        1 attcgctcag ccctcggcag ctcttgtcgc gctctcacct cgattggtcg agcccgaacc
       61 gtcatggctg cgcccatgta acctggatcc accgcggagc gggcagtggc ggtgcgggcc
      121 ccccgtcgag tcgggagtca acatgctgcg ggccgcgtgg cgtgcgctga gctctgttcg
      181 tgcccaggcg gtgacacggg ccccagtccc tgcgctgagg ggcggaagta gcgccagtct
      241 gctctctgcg cgctgtggcc tgcagcctcc gagtctactg cgcgccgcgc gagcatacgc
      301 cgccgtccag aaaccagtcc aacccaagca ggacgatgaa ccaccctcct ctgcgttcat
      361 caaagaatac aaggacatca tccccaacat agagaaggtt gatgatgttg tgaaaagaat
      421 cttgtctttg gaaatggcca gcaggaaaga gaagttaaaa atcaagcaag aacaattgat
      481 gaacaagatt gtggaaaacc ctgaggattc cagaaccttg gaagctcaaa tcattgcctt
      541 gactgtcagg atccgcaatt atgaagaaca catgcagaaa catcgaaagg acaaagccca
      601 caaacgccat ctgctgatga gcatcgaccg gaggaaaaag ttgctcaaaa tcctccgtca
      661 gaccaactat gatgtcttcg aaaagacatg caaggagcta ggggtggaat ataccttacc
      721 ccctctgcat ttccaaaagg ttcaccgccg cttcctggcc aagaaggctc tgtgcattcg
      781 ggtttaccag gaggtgcaaa agctgaagaa gcaaaaaagg gccttaaaag ctgctgcagc
      841 tgctgccaaa aaagaaaaaa atgagggggt gccagagaac ccttcaaatg ccgtaccaga
      901 gaagacccaa gtgaactaat aaagtctgtt cccgtgaaaa aaaaaaaaaa aaaaaaaaa
//
