LOCUS       NM_026401               2321 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosomal protein L57 (Mrpl57), mRNA.
ACCESSION   NM_026401
VERSION     NM_026401.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Cheong,A., Lingutla,R. and Mager,J.
  TITLE     Expression analysis of mammalian mitochondrial ribosomal protein
            genes
  JOURNAL   Gene Expr Patterns 38, 119147 (2020)
   PUBMED   32987154
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   3  (bases 1 to 2321)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   4  (bases 1 to 2321)
  AUTHORS   Suzuki,T., Terasaki,M., Takemoto-Hori,C., Hanada,T., Ueda,T.,
            Wada,A. and Watanabe,K.
  TITLE     Proteomic analysis of the mammalian mitochondrial ribosome.
            Identification of protein components in the 28 S small subunit
  JOURNAL   J Biol Chem 276 (35), 33181-33195 (2001)
   PUBMED   11402041
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK011558.1.
            
            On Apr 5, 2007 this sequence version replaced NM_026401.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK011558.1, BY710814.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2321              AK011558.1         2-2322
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 30.51 cM"
     gene            1..2321
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /note="mitochondrial ribosomal protein L57"
                     /db_xref="GeneID:67840"
                     /db_xref="MGI:MGI:1915090"
     exon            1..84
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /inference="alignment:Splign:2.1.0"
     exon            85..2321
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..401
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /note="ribosomal protein 63, mitochondrial; mMRP63;
                     mitochondrial ribosomal protein 63; mitochondrial
                     ribosomal protein L53"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL63"
                     /protein_id="NP_080677.1"
                     /db_xref="CCDS:CCDS27161.1"
                     /db_xref="GeneID:67840"
                     /db_xref="MGI:MGI:1915090"
                     /translation="MFLTAVLLRGRIPGRQWIGKHRRPRTVSFQAKESMIRRLEVEAE
                     NHYWLSMPYMTAEQECGHAAERRAQAFEAIKAAATSKFPKHRYIADQLDHLNISKKWS
                     "
     regulatory      503..508
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /note="hexamer: ATTAAA"
     polyA_site      526
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /note="major polyA site"
     regulatory      1419..1424
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
                     /note="hexamer: AGTAAA"
     polyA_site      1453
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
     polyA_site      1560
                     /gene="Mrpl57"
                     /gene_synonym="2610025P17Rik; Mrp63"
ORIGIN      
        1 gagaccggaa gcagcgcgcc gccgcatcgg tcgggggacg cggagcgccg aggggagcgt
       61 gtcccgggcc ggttggtacg cgaggaggca ccatgttcct caccgctgtc ctcctccgcg
      121 gccgcattcc gggcaggcag tggatcggga agcaccggcg gccgcgtacc gtgtctttcc
      181 aagcgaagga gagcatgatc cgtcgcctgg aggtggaggc cgagaaccac tactggctca
      241 gcatgcccta catgacagca gagcaggagt gcggccacgc cgcggagcga cgggcccagg
      301 cttttgaagc catcaaggca gcggccactt ccaagttccc taagcataga tacattgcag
      361 accagctaga ccatctcaac atctcgaaga aatggtccta acccttcaag attatggata
      421 ccggactgct ctatccttac ttggtcctgg agctgagaaa atgtaattta tgtaccagtg
      481 tgaccccttc gaccagtatc ttattaaagc aaacatgatt gattaatagt tgtctcatac
      541 ggaatacttg ggaccctacc taggcgtttg tttcacacct gtaatcccaa cattaagagg
      601 tggaggcagg aaaatctttg ctgatgtagt tagtaagacc tagactcaga aggccaaaag
      661 agactgtttg aggctccata tgtgcataat cggtctattt tcagggttgt tttttatttt
      721 ttctggccta aagcttgcag cagccctccc tgtgcctagc tactggaatt acaggcatgg
      781 ttccctgccc ttctgtaaaa tgtggggttt tttttttttt tgtttgtctc actatatagc
      841 catagaactt gctgtatagg ctaggctggc cttgacctcc gagatctact ggcctctgcc
      901 tcccaagtgc tgtgactaaa ggcaagtgcc accatacctt gcacctttta gatttaaatg
      961 ctgtaaaact acaaactgat gagtcttaag gctgaggtac ttggctagag ctttgttgta
     1021 caaggggtgt tttcttactt tctgtctagg atagccattc tcaacctgtt gggcatgacc
     1081 ccttgtggtg gttgcagaac cctttcatga ggctgagtat cagagatttg tattatgata
     1141 acagcaaaat tacagttgtg aagtaacaat gaaaataatg ttatggttgg agtcaccaca
     1201 acatgaggaa ctgtattaaa gagtgtaagg gaggttgaga accactgctc tagaatagag
     1261 cctgcctttg atttcacagc attctgtaag tggaagtagg atctgaagtg ttaggtcaac
     1321 ttccatgcaa atttgaggcc agcctgagat agatgagacc atttcccaaa agaagagtgt
     1381 tttcttttag aatttggatt ctgtgagtgg acgtgtgaag taaagatgtt tactagaact
     1441 gttaacagga aaatttctgt ttgtttggtt ttttgagctc gtctatattg cccaccttag
     1501 cctggaactc ctaaatggat acaaacagtg caattttttt ttaaagtttg tttaaaaaca
     1561 ccgtttttgg ttttttgttt ttttttttaa tgttgttggt ttgtttttca agacaggttt
     1621 tctctgtgtg gccctagatg ttgtcagact cactctgtag accaggctgg cctcaaactc
     1681 atagagaact gccttcctct tgcctcttaa gtgctggaat aaaggtgtgt accaccacca
     1741 cctgtgcaca caactttttt gagtaggtct gtgtaggttg ttgaacttat ggactgaatt
     1801 gatcctcctg accgagtctc ccgagtttct gggtctacag atgcagagca acttgggatt
     1861 tttttattat taatatattt tttttgattt ttcaagacag ggtttctctg tatagtatta
     1921 tttttttaat acagatctta ctgtatagtc ttggcctcaa atttagatgg gcaccgatct
     1981 ctgtctccct agtgctatat actaccatac ccaatccttt ttaatctttt gagttggtga
     2041 tttcataaag ttaccaagag aaaaaagtac aagtccattg taactataac caagtaacat
     2101 ttttcctcta accatatcaa aacctagaaa ttgctatact ctgtagagct ttgcatatgc
     2161 acccatgttt atgtgtacaa gtctacttag ttgtcatata accatggttc cattgctata
     2221 gcatccttca ttctctttgt agaaacctga cttccccact attgttcatc tctgtttttg
     2281 ggaagaagga tctgtaagta aaataattta tattggcttt t
//
