LOCUS       NM_027098                772 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus mitochondrial ribosomal protein L30 (Mrpl30),
            transcript variant 1, mRNA.
ACCESSION   NM_027098
VERSION     NM_027098.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Cheong,A., Lingutla,R. and Mager,J.
  TITLE     Expression analysis of mammalian mitochondrial ribosomal protein
            genes
  JOURNAL   Gene Expr Patterns 38, 119147 (2020)
   PUBMED   32987154
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   3  (bases 1 to 772)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   4  (bases 1 to 772)
  AUTHORS   Goldschmidt-Reisin,S., Kitakawa,M., Herfurth,E.,
            Wittmann-Liebold,B., Grohmann,L. and Graack,H.R.
  TITLE     Mammalian mitochondrial ribosomal proteins. N-terminal amino acid
            sequencing, characterization, and identification of corresponding
            gene sequences
  JOURNAL   J Biol Chem 273 (52), 34828-34836 (1998)
   PUBMED   9857009
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC119189.8.
            
            [WARNING] On Jul 24, 2024 this sequence was replaced by
            NM_027098.4.
            
            On Oct 5, 2017 this sequence version replaced NM_027098.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI158951.1, BI853143.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               AC119189.8         92541-92648         c
            109-189             AC119189.8         90102-90182         c
            190-266             AC119189.8         89110-89186         c
            267-347             AC119189.8         87715-87795         c
            348-494             AC119189.8         85291-85437         c
            495-772             AC119189.8         84787-85064         c
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 16.17 cM"
     gene            1..772
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /note="mitochondrial ribosomal protein L30"
                     /db_xref="GeneID:107734"
                     /db_xref="MGI:MGI:1333820"
     exon            1..108
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     exon            109..189
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     exon            190..266
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     CDS             216..698
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /note="39S ribosomal protein L30, mitochondrial; large
                     ribosomal subunit protein uL30m"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL30m precursor"
                     /protein_id="NP_081374.1"
                     /db_xref="CCDS:CCDS14896.1"
                     /db_xref="GeneID:107734"
                     /db_xref="MGI:MGI:1333820"
                     /translation="MAGVLRSAFPRPPCRLQTVKKGAESLIGTEWIRHKFTKSRIPDK
                     VFQPKPEDHEKYGGDPQNPHKLHIVTRIRSTKRRPYWEKDTIKMLGLQKAHSPQIHKN
                     IPSVNAKLKVVKHLIRIQPLKLPQGLPTEETMSSTCLKSTGELVVQWHLKPVEQEAKS
                     "
     exon            267..347
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     exon            348..494
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     exon            495..772
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /inference="alignment:Splign:2.1.0"
     regulatory      748..753
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /note="hexamer: ATTAAA"
     polyA_site      772
                     /gene="Mrpl30"
                     /gene_synonym="2310001L22Rik; L30mt; MRP-L28; MRP-L30;
                     Rpml28"
                     /note="major polyA site"
ORIGIN      
        1 acggtctgtg acggcaacgg cgtggtttga atgttgcact gggtccacct gcctctgttc
       61 ctctccttcc ggctgcgggg acgttcggag tggacacagc ggtcgccggt tcccactatg
      121 tagccctggc tggaatgctg tccgctctga tcaccattgg tgttccccat ccctgatctc
      181 ctggtggagc ctctgaagag agaattccca cccccatggc tggggttctg cgctccgcgt
      241 tcccgaggcc tccatgcaga ctgcagactg tgaagaaagg tgcagaatct ctcattggta
      301 cagaatggat tcgtcacaaa tttaccaaat caagaattcc agataaagtg tttcagccta
      361 aacctgaaga tcatgaaaag tatggtgggg acccccagaa ccctcacaaa ctgcacattg
      421 tcacaagaat aagaagtaca aagaggcgtc catactggga aaaagatacc atcaagatgc
      481 ttggactaca gaaggcacac agccctcaaa ttcacaagaa catcccatcg gtgaatgcaa
      541 agctgaaagt ggttaaacac ttgatacgca tccagcctct gaagctgcca cagggacttc
      601 ccacagaaga gaccatgtcc agcacatgcc tcaagagcac tggggagttg gtcgtgcagt
      661 ggcatctgaa gcctgtggag caggaagcga agtcctgacg ccacacagct tcagctcaca
      721 gatgcactta ctaaggaaac cgttctcatt aaagtgtatg ttcatccagt ca
//
