LOCUS       NM_001081100            1661 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus MORN repeat containing 1 (Morn1), transcript variant
            1, mRNA.
ACCESSION   NM_001081100 XM_131829
VERSION     NM_001081100.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL670413.19.
            
            On Feb 6, 2007 this sequence version replaced XM_131829.6.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK045316.1, BC132619.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               AL670413.19        45229-45333
            106-177             AL670413.19        46073-46144
            178-276             AL670413.19        48138-48236
            277-387             AL670413.19        49535-49645
            388-478             AL670413.19        50921-51011
            479-566             AL670413.19        51714-51801
            567-663             AL670413.19        59918-60014
            664-774             AL670413.19        60742-60852
            775-898             AL670413.19        69580-69703
            899-1071            AL670413.19        70069-70241
            1072-1193           AL670413.19        87331-87452
            1194-1276           AL670413.19        87535-87617
            1277-1320           AL670413.19        101054-101097
            1321-1661           AL670413.19        103819-104159
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 86.17 cM"
     gene            1..1661
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /note="MORN repeat containing 1"
                     /db_xref="GeneID:76866"
                     /db_xref="MGI:MGI:1924116"
     exon            1..105
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..1463
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="MORN repeat-containing protein 1 isoform 1"
                     /protein_id="NP_001074569.1"
                     /db_xref="CCDS:CCDS38991.1"
                     /db_xref="GeneID:76866"
                     /db_xref="MGI:MGI:1924116"
                     /translation="MEAAGDPYQASLQPRRHSPRLPPRNGYGVYVYPNSFFRYEGEWK
                     GGKKHGHGKLLFKDGSYYEGEFVDGEITGEGCQHWAWSGNTYSGQFVLGEPQGHGVMK
                     YKAGGRYEGELSQGLREGQGFLEDQDGQVYQGSFHDNKRHGRGQMIFKNGDKYEGDWV
                     RDQRQGHGVLCCADGSTYKGQWHSDVFSGLGSLVHCSGVTYCGMFINGHPAEQAKKIV
                     ILGPEVLEVVQGSPFTLSVQLQQDDGEVAKSESGRVLKISAGVRYVQLPEYSEVSFFK
                     MDEDYMETPIQTPFGFQCISYPLSVPMSWGPEPGSTVESARADLLLSKRDSEPVLDSG
                     AFHGQGDTLSILPARRHKPCCQQVDHGCAEFVDILLGAPPPGMQPYLFLPGTLEKTLG
                     RPKGGPSSPEVLPTAQEPLKGTNRPDGTTVEPPTAAYLGEYVLMVCDVTSPPFLGHRL
                     PTTFKHLRILAKGDTHWPHVPEDHQKL"
     exon            106..177
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            178..276
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            277..387
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            388..478
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            479..566
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            567..663
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            664..774
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            775..898
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            899..1071
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1072..1193
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1194..1276
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1320
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1661
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1637..1642
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1656
                     /gene="Morn1"
                     /gene_synonym="2900057D20Rik; 4930417P05Rik"
                     /note="major polyA site"
ORIGIN      
        1 atggttgcta gggaaacttt ggcggcaaga tggaggcagc tggcgatccc taccaggctt
       61 cgctccagcc gcgtcggcac tcgccgagac tgccgccgcg aaacggctat ggcgtatatg
      121 tatacccaaa ttctttcttc cgctatgaag gagaatggaa gggaggcaag aaacacggtc
      181 atgggaagct attgtttaaa gatggaagtt actacgaagg cgaatttgtg gatggagaaa
      241 ttactgggga aggctgccag cactgggcct ggtcaggaaa cacctactct ggacagtttg
      301 ttttaggaga gcctcaaggg cacggcgtca tgaagtacaa agccggaggt cgctatgaag
      361 gggagctctc ccaaggcctg agggaagggc aggggtttct ggaggatcag gacgggcagg
      421 tataccaggg ttccttccat gacaacaaga gacatggccg tgggcagatg atctttaaga
      481 atggtgacaa gtacgaaggt gattgggttc gagaccagcg tcagggacac ggggtgctgt
      541 gctgtgccga cggctccaca tacaagggac agtggcacag tgatgtcttc agtggactcg
      601 gcagcttggt ccactgctca ggagtcacct actgtgggat gttcattaac ggccacccag
      661 cagaacaggc taagaaaatt gtgattctgg gtccagaggt actggaagtg gtccaagggt
      721 ctcccttcac gttgagtgta cagctgcagc aagatgatgg ggaagttgcc aaaagtgaga
      781 gtggccgggt cctgaagatc tcagcaggag tcagatatgt gcaactccca gaatactctg
      841 aggtcagctt tttcaagatg gatgaagact acatggagac acccatccag accccatttg
      901 ggttccagtg catttcctac cccctgtctg tgcccatgtc ctgggggcca gagcctgggt
      961 ctactgtgga aagtgccaga gctgacctgc tactctccaa gagagactca gagcctgtgc
     1021 tggactcagg agccttccat ggccagggag acaccctcag catcctgcca gccaggagac
     1081 acaaaccctg ctgtcagcaa gtggaccacg gctgtgccga gtttgtggac atcctcctcg
     1141 gagcccctcc gcctggcatg cagccttacc tgttcctgcc cggcacgctg gagaagactc
     1201 tcggcaggcc taaaggtggc ccaagttccc cagaggtgct gcccactgcc caggaacctc
     1261 taaaaggcac caacaggcct gatgggacca cagtagagcc accgacagct gcatatctag
     1321 gggagtatgt gctcatggtc tgtgatgtga ccagccctcc cttcctgggc cacaggctgc
     1381 ccaccacctt caaacacctg cggatcttag ccaaggggga cacccactgg ccccatgtcc
     1441 ctgaagatca ccagaagctc taagctagcg gctactcttg gctgttggac ataaaggagc
     1501 cagcaatacc ctcatgggaa ggccagcctt ccctgaatgg agattgatgc tgcttctccc
     1561 agggaccaca tcctctctat tcctaaacaa cctgagcgtt aggactgccc acgtgagccc
     1621 cacagctact gacgtcaata aaattctaaa taccaaccct g
//
