LOCUS       NM_001310717            2132 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus matrix metallopeptidase 27 (Mmp27), mRNA.
ACCESSION   NM_001310717 XM_006509858
VERSION     NM_001310717.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Tocchi A and Parks WC.
  TITLE     Functional interactions between matrix metalloproteinases and
            glycosaminoglycans
  JOURNAL   FEBS J 280 (10), 2332-2341 (2013)
   PUBMED   23421805
  REMARK    Review article
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Tang T, Li L, Tang J, Li Y, Lin WY, Martin F, Grant D, Solloway M,
            Parker L, Ye W, Forrest W, Ghilardi N, Oravecz T, Platt KA, Rice
            DS, Hansen GM, Abuin A, Eberhart DE, Godowski P, Holt KH, Peterson
            A, Zambrowicz BP and de Sauvage FJ.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
REFERENCE   3  (bases 1 to 2132)
  AUTHORS   Nuttall RK, Sampieri CL, Pennington CJ, Gill SE, Schultz GA and
            Edwards DR.
  TITLE     Expression analysis of the entire MMP and TIMP gene families during
            mouse tissue development
  JOURNAL   FEBS Lett 563 (1-3), 129-134 (2004)
   PUBMED   15063736
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK155813.1, AC115689.22 and AK159182.1.
            
            On Jul 18, 2015 this sequence version replaced XM_006509858.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK155813.1, SRR5189676.132917.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                AK155813.1         4-82
            80-80               AC115689.22        24606-24606         c
            81-1662             AK155813.1         84-1665
            1663-2132           AK159182.1         1434-1903
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 2.46 cM"
     gene            1..2132
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /note="matrix metallopeptidase 27"
                     /db_xref="GeneID:234911"
                     /db_xref="MGI:MGI:3039232"
     exon            1..206
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..1640
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /note="matrix metalloproteinase 27"
                     /codon_start=1
                     /product="matrix metalloproteinase-27"
                     /protein_id="NP_001297646.1"
                     /db_xref="CCDS:CCDS80952.1"
                     /db_xref="GeneID:234911"
                     /db_xref="MGI:MGI:3039232"
                     /translation="MPYKQKQALTEETGMKCLLSLMVNFITLSAAFPPDRKDKNEENN
                     QLAQAYLNQFYSLEIEGSHFVQSKNRSLFDGKLREMQAFFGLTVTGKLDSDTLAIMKV
                     PRCGVPDVGQYGYTLPGWRKYSLTYRIMNYTPDMTPADVDEAIQKALQVWSKVTPLTF
                     TRISKGVADIMIAFRTGVHGWCPRHFDGPLGVLGHAFPPGLGLGGDTHFDEDETWIAK
                     DGEGFNLFLVAAHEFGHSLGLSHSNDQTALMFPNYISLDPSKYPLSQDDIDGIQSIYG
                     SPPKVTTKPSGNSEPHACDPTLTFDAITTFRREVMFFKGRHLWRVYSDIAGAEFEFID
                     SFWPSLPADLQAAYESPRDELLVFKDENFWVIRGYSVLPGYPKSIHTLGFPRRVKKID
                     AAVCDHDTRKTFFFVGIWCWRYDEMAQAMDRGFPQRIIKCFPGIRLRVDAVFQHNGFL
                     YFFHGSRQFEYDMKAKNITQVIKTNSWFLCNEPLNASFNVSVKGKANSIGTVILHHKR
                     LSLLTFSIVHVLTKTYN"
     exon            207..445
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            446..594
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            595..726
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            727..888
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            889..1009
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1140
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1300
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1404
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
     exon            1405..2132
                     /gene="Mmp27"
                     /gene_synonym="Gm180"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgctttgc tgttattaat taagtgatta cttcatgcca cgtctcactg tcaactttct
       61 aaatgccata caaacagaaa caagctttaa ctgaagagac aggaatgaag tgccttctgt
      121 ctctgatggt taattttata acactttccg ctgcatttcc tccagacagg aaggacaaaa
      181 atgaggagaa caaccaactg gcccaggcat atctcaacca gttctactct cttgaaatag
      241 aagggagtca ttttgtccaa agcaagaaca ggagtctctt tgatggaaaa cttcgggaaa
      301 tgcaggcatt tttcggattg acagtgactg gaaaactgga ttcagacaca cttgcgatca
      361 tgaaagtgcc caggtgtggg gtaccagatg tggggcaata tggctacaca ctccctgggt
      421 ggagaaaata cagccttaca tacagaataa tgaactatac tcctgatatg acaccagctg
      481 atgtggatga ggctattcag aaagctctac aagtttggag caaggtcact ccactgacgt
      541 ttaccaggat atccaagggg gttgcagata taatgatagc attcaggaca ggagtccatg
      601 gctggtgtcc tcgtcacttt gatggtcctc tgggagtcct tggccatgcc tttcctcctg
      661 gtctgggtct aggtggtgac actcactttg acgaagatga aacatggata gccaaggatg
      721 gggaagggtt caacttgttt cttgtggctg ctcatgaatt tggtcactct ctggggctgt
      781 cccactccaa tgatcaaaca gccttgatgt tccccaatta catctccctg gatcctagca
      841 aatacccact ttctcaggat gatattgatg ggatccagtc catctatgga agtccaccta
      901 aggtaaccac caagccaagt ggaaattctg aaccccacgc ctgtgacccc accttgactt
      961 ttgatgctat cactactttc cgcagggaag ttatgttctt taaaggcagg cacttatgga
     1021 gggtctactc tgatattgct ggtgctgagt ttgagtttat tgattccttc tggccatctc
     1081 tgccagctga tcttcaagct gcctatgaaa gccccagaga tgagctcctt gtttttaaag
     1141 atgagaattt ctgggtcatc aggggatatt ctgtcttgcc cggttacccc aaatccatcc
     1201 acacactcgg atttccaaga cgtgtgaaga aaattgatgc agccgtctgt gatcatgata
     1261 caagaaaaac cttctttttt gttggcatct ggtgctggag gtatgatgag atggcacaag
     1321 caatggacag aggattccca cagaggataa taaagtgctt cccaggaatt cgcctccgtg
     1381 tggatgctgt cttccaacat aatggattcc tctatttctt ccatgggtcg aggcaatttg
     1441 aatatgacat gaaggcgaaa aatatcaccc aagtgatcaa aaccaattct tggttcctgt
     1501 gtaacgaacc attaaacgca tcattcaatg tcagtgtcaa aggaaaagca aattcaattg
     1561 gcacagtgat attacatcat aaaaggttaa gcttgctcac tttcagtatt gttcatgtgc
     1621 tgacaaaaac atacaattaa caataaattc cacaaataaa ccaaaacaaa tcttttaacc
     1681 tgaactctgc ctcaggaaga ctcaagagtg ggagagatga cccagtggtt aagtgcactg
     1741 gctgctcttt caaaggaccc aggtttgatt ctcagtaccc acatggcagt ccacagctct
     1801 ctgtaactcc agacccaggg aaatctgatg ccctctctgg cctctgaggg cactgcacaa
     1861 gcatggtgca tagacatata catgcaagca aacggctata tatttaaaat aaaatgaaaa
     1921 agtaaaataa ttgagcccaa ttctttagca tcaagttctt actcctacta tatatcagct
     1981 gggtaaccaa taaccagtta aagtatctga ttcttctaac agtgaagttt taaatatgac
     2041 aaaaatctct cacttatttt gagtctaatt aatgatttgc aaacttggaa aattaaagca
     2101 tgtcttaaaa ataaacatta aagacaattc tt
//
