LOCUS       NM_001163501            6856 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus mitotic deacetylase associated SANT domain protein
            (Mideas), transcript variant 2, mRNA.
ACCESSION   NM_001163501 XM_001473233 XM_001477247
VERSION     NM_001163501.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6856)
  AUTHORS   Turnbull RE, Fairall L, Saleh A, Kelsall E, Morris KL, Ragan TJ,
            Savva CG, Chandru A, Millard CJ, Makarova OV, Smith CJ, Roseman AM,
            Fry AM, Cowley SM and Schwabe JWR.
  TITLE     The MiDAC histone deacetylase complex is essential for embryonic
            development and has a unique multivalent structure
  JOURNAL   Nat Commun 11 (1), 3252 (2020)
   PUBMED   32591534
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6856)
  AUTHORS   Hammock EA, Eagleson KL, Barlow S, Earls LR, Miller DM 3rd and
            Levitt P.
  TITLE     Homologs of genes expressed in Caenorhabditis elegans GABAergic
            neurons are also found in the developing mouse forebrain
  JOURNAL   Neural Dev 5, 32 (2010)
   PUBMED   21122108
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 6856)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159649.3 and AC125071.3.
            
            On or before Jul 23, 2009 this sequence version replaced
            XM_001473233.1, XM_001477247.1.
            
            Transcript Variant: This variant differs in the 5' UTR, compared to
            variant 1. Variants 1 and 2 both encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK155768.1, SRR13422601.2288670.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AC159649.3         69991-70097         c
            108-1777            AC125071.3         20227-21896
            1778-2077           AC125071.3         22891-23190
            2078-2423           AC125071.3         32049-32394
            2424-2490           AC125071.3         34105-34171
            2491-2633           AC125071.3         34633-34775
            2634-2737           AC125071.3         34897-35000
            2738-2813           AC125071.3         35599-35674
            2814-2902           AC125071.3         36307-36395
            2903-3052           AC125071.3         38074-38223
            3053-3265           AC125071.3         39543-39755
            3266-3462           AC125071.3         41619-41815
            3463-6856           AC125071.3         42089-45482
FEATURES             Location/Qualifiers
     source          1..6856
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 39.07 cM"
     gene            1..6856
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /note="mitotic deacetylase associated SANT domain protein"
                     /db_xref="GeneID:238317"
                     /db_xref="MGI:MGI:2685106"
     exon            1..107
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            108..1777
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     CDS             353..3622
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /note="ELM2 and Myb/SANT-like domain containing 1"
                     /codon_start=1
                     /product="mitotic deacetylase-associated SANT domain
                     protein"
                     /protein_id="NP_001156973.1"
                     /db_xref="CCDS:CCDS49109.1"
                     /db_xref="GeneID:238317"
                     /db_xref="MGI:MGI:2685106"
                     /translation="MNLQAQSKAQSKRKRCPFGDQEPAAKEQPPPLQSPPQSLRAKEE
                     QYGAHEGPTGVASTTQPVELSPPNNLALLNSVVYGSERTTAAMLSQQAQVSSVKWPSS
                     VMAPGRGLERGGGGGISDSGWQQQPGQPPPHSTWNHLPLYGGPKGSPHPGVGVPPYYN
                     HPEALKGNKPGGPQLDHYGNAVQPMVPQKVQLEVGRPQAPLNSFHAAKKPPNQTLPLQ
                     PFQLAFGHQVNRQVFRQGPQPSNPTASFPPQKQQQQQQPAALPQMQLFENYYPMHQLP
                     SQQHQDFGLAPGGPLGQTHLAHRSMAPYPFSHNPDMNPELRKALLQDPASQPVLPQPQ
                     MAFPRRSRRLSKEGILPSNSLDGAGTQPGQEPASNLFLHHWSLPQPPPGTLGQPHSEA
                     LGFPLELRESQMLADGDRLAPNGREREPPAMGNEEVMRAGGLGDCGQMIRSGVIQSTK
                     RRRRVSQEANLLTLAQKAVELASMQDANGSEEKRKSVLATTSRCGVEFSEPALAAKRA
                     REESGMVPLIIPVSVPVRTVGPTEVAQVGGADEDGTGLEQYPTEHKPSVIVTRRRSTR
                     VPGTDAAAQAEDLNVKLEGEPSMRKPKQRPRPEPLIIPTKAGTFIAPPVYSNITPYQS
                     HLRSPVRLADHPSERSFEPPPYTPPPILSPVREGSGLYFNAIISTSNIPAPPPITPKS
                     AHRTLLRSNSSEVTPPVLSVMGEATPVSIEPRINVGTRFQAEIPMMRDRALAAFDPHK
                     ADLVWQPWEHLESSWEKQRQVDDLLTAACSSIFPGAGTNQELALHYLHESRGDILEAL
                     NKLLLRKPLRPHNHPLATYHYTGSDQWKTAERKLFNKGIAIYKKDFFLVQKLIQTKTV
                     AQCVEFYYTYKKQVKIGRNGTLTFGDLDIGDEKSGQEEVEVDVKTSQKFPRVPPPRRE
                     SPSEERLEPKREVTEPRKEGEEEVPDTQEKGEQEEGRERCRRAAAVKATQTLQANEAA
                     NDVLILRSHEPNAPGSAGIQTSEKPREGPGKSRRALPFTEKKKKAEAFNKTQNQENTF
                     PCKKCGRVFYKVKSRSAHMKSHAEQEKKAAALRLKEKEAAAAAAHQQALREESGEGEK
                     G"
     exon            1778..2077
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2078..2423
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2424..2490
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2491..2633
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2634..2737
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2738..2813
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2814..2902
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            2903..3052
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            3053..3265
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            3266..3462
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
     exon            3463..6856
                     /gene="Mideas"
                     /gene_synonym="9430029N19Rik; C130039O16Rik; Elmsan1;
                     Gm260"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagtgacg actgcgccgt cccgagagca acaaagtttg agtctgctgg tcgcgctcga
       61 attgcgtccc gcgccccctc ggagctgccc agggatccag cgtgcaggct ccaggacctg
      121 gcacaggcag gcatcatgat tagggaagtg tagctgagcg caagagcctc cctagaagag
      181 gaaggaccag cggacatttc ctagctcttg cctgaaggct cctgcgtttt cctctgcctc
      241 tcttctgccc tccctggcta ctggactggg gccaggcttc cagcaggacc tcctaccaag
      301 ggatgggcag cagctgaagg acgtctcact gccaggctta gtcggccaca ccatgaacct
      361 ccaggcccag tccaaggctc agagtaaacg caagcgttgt ccttttgggg accaggagcc
      421 agccgccaag gaacagccac caccactgca gagtccacca cagtccctca gagctaagga
      481 ggaacagtac ggggcccacg aaggtcccac aggggtggcc tccaccaccc agcctgtgga
      541 gctgtctcct cctaacaacc tggctctcct gaacagtgtg gtgtatggat ctgagaggac
      601 cacggcagcc atgttgtccc agcaggccca agtaagctcg gtaaagtggc ccagctctgt
      661 gatggctcca gggcggggcc tggaacgtgg cggaggtgga ggcatcagtg acagtggctg
      721 gcagcagcaa cctggccagc ccccacccca ctccacgtgg aatcacctgc ccctctacgg
      781 tggacccaaa gggagccctc atccaggtgt gggggtacct ccctactata accacccgga
      841 ggcactgaag gggaacaaac ctggaggtcc ccagctggat cactatggaa acgcagtgca
      901 gcccatggtg ccacagaagg tgcagctgga ggtggggagg ccccaagcac ccttgaactc
      961 tttccatgca gccaagaaac ccccaaacca gacactgccc ttgcaaccct tccagctggc
     1021 atttggccac caggtgaacc gtcaggtctt ccggcagggc cctcagccct ctaaccccac
     1081 cgcctccttc ccacctcaga agcagcagca gcaacagcaa ccggcagccc tgccccagat
     1141 gcagctattt gagaactact accccatgca tcaactgcct tcgcaacagc accaggactt
     1201 tggcctggca ccaggtgggc cactgggaca gacccacctg gctcaccgca gcatggcccc
     1261 ttaccccttt tcccacaacc cagatatgaa cccagaactg cgcaaggctc tcctgcagga
     1321 ccctgcttca cagcccgtgc tacctcagcc ccagatggcc ttcccacgtc gctcccgccg
     1381 tctctccaag gagggaattc tgccttccaa ctccctcgat ggagctggca cccaacctgg
     1441 gcaggagccc gcgagcaatc tgttccttca ccactggtct ctgccgcagc caccgccagg
     1501 caccctgggg cagccccatt ctgaagccct gggattcccg ttagaactga gggagtcaca
     1561 gatgctggcg gatggggaca gactggcacc caatggtcgg gagcgggagc ctcccgccat
     1621 gggtaatgag gaggtcatga gagcaggggg cctcggggac tgtggacaga tgatacgaag
     1681 tggggtgatc cagagcacaa aacggagacg cagggtgtcc caggaggcta atttgctgac
     1741 cctggcccag aaggcagtgg agctggcctc tatgcaggat gccaatggct ctgaggagaa
     1801 gcggaaaagc gtgttggcca caacttccag gtgtggcgtg gagttttccg agcctgcctt
     1861 agccgccaag agagctcggg aggagagtgg gatggtaccc ctcatcattc ctgtgtctgt
     1921 tcccgtgagg actgtgggtc caactgaggt ggcccaagtc ggaggtgctg acgaggatgg
     1981 gactggtctt gagcagtacc ccaccgagca caagccgtca gtcatcgtga cccgcaggcg
     2041 gtccacccga gttcccggga cagatgctgc agctcaggct gaagacctga acgtcaagtt
     2101 ggaaggggag ccttccatgc ggaaaccaaa gcagcggccg cggccggagc ccctcatcat
     2161 ccccaccaag gcgggcactt tcatcgcccc tcctgtctac tccaacatca ccccttacca
     2221 gagccacctg cgctctcccg tgcgccttgc tgaccacccc tctgagcgga gctttgagcc
     2281 ccccccttac acaccacccc ccattctcag ccccgtccgg gaaggctctg gcctctactt
     2341 caatgccatc atatcaacca gcaacatccc ggcccctcct cctatcacgc caaagagtgc
     2401 ccatcgaacc ctgctccgct ctaatagctc tgaagtcacc ccgcctgtcc tctctgtgat
     2461 gggggaggcc acccctgtga gcatcgaacc acgaatcaac gtcgggaccc ggttccaggc
     2521 agaaatcccc atgatgagag accgagcgct ggcagctttt gacccccata aggctgactt
     2581 ggtgtggcag ccatgggaac atcttgagag cagctgggag aagcagagac aagtggatga
     2641 cctgctgaca gctgcctgtt caagcatttt ccctggggcc ggcaccaacc aggagctggc
     2701 cctgcactat ctgcatgagt cccgggggga catcctggag gcgctgaata agctgctact
     2761 gaggaagccc ctgcggcctc acaatcaccc actggcgaca tatcactaca caggctctga
     2821 ccagtggaag acggctgaga ggaagctgtt caacaagggc attgccatct ataagaaaga
     2881 tttcttcctg gtgcagaagc tgatccagac caagactgtg gcccagtgcg tggaattcta
     2941 ctacacctac aagaaacagg tgaaaatcgg ccgcaacggg acgctcacct tcggcgacct
     3001 ggatatcggt gacgagaagt caggccaaga ggaggttgag gtggacgtta agacttctca
     3061 gaagttccca agggtgcctc ctcccagaag agagtcccca agtgaagaga ggctggagcc
     3121 taagagagaa gtgacagaac ccaggaagga gggggaggag gaggtgccag acacccagga
     3181 gaagggagag caggaggagg ggcgtgagcg ctgccggcgg gccgctgccg tcaaagctac
     3241 acagacacta caggccaatg aggcggccaa tgacgttctc attctccgga gccatgagcc
     3301 caacgccccg gggtctgcag gtatccagac ctcagagaag ccgagggagg ggccggggaa
     3361 gtcccgaagg gcactgcctt tcacagagaa gaagaaaaaa gccgaggcat ttaataaaac
     3421 ccagaaccag gagaacacct tcccttgtaa aaagtgcggc agggtgtttt acaaggtgaa
     3481 gagccgcagt gctcacatga agagtcacgc agagcaagag aagaaggccg cagctctgag
     3541 gctgaaggag aaggaggctg cagcggccgc cgcacatcag caggcgctga gagaagagag
     3601 cggcgaaggg gagaagggct gaggaccctg ctggatccta ttgccgggct ccccagcacc
     3661 ccagtccctg gaacctctag aaggggccag gagagggtca cttggacttt gctctgcaga
     3721 acaaacccga taatgaaaaa taaaccggct cttttattta caaaggccaa ggacagtgtt
     3781 aagggctgca ggatccagtt ctctcagtat ctggttggtc ccgagttctg ctttcccgga
     3841 gcctagagag gccgggccac ttggaatggg ctagagctct acagctgctt ctctgatctc
     3901 tgctgttgca tctgtgcctc tttcatccca ggtccttagt aagccaccac ggcaagccaa
     3961 gcacaagctc gccccatggc agcattgttc ctccttccgc agaggacctg gaaggctgtg
     4021 cagactttta tctaagcccc cagagggact ccttagagag cggtggcctt aacacctgtg
     4081 ttgtccttgt gctgtcatgc tcaggccgga gttgctccaa caatcccgtc tggaggtccc
     4141 cacttcctta ggcgtatctc ggagggctat tttcaacccc tttgctgctt gttaacagcc
     4201 cgtctggggc tgtcaaagtt ttctcagaag tttggagttc gtgccctgct ctcagcctac
     4261 tacacggaga ggaactgttc agaggccaga agatgcagag ctctgcccga gagatctttt
     4321 gacaaactca tgactagcat tttatacctt tgagtcccgg aggctgctaa aggagcctca
     4381 agcaggtcct agagaggcct ggcctgctct ttggtgccag cttccttctt gcctgtcgag
     4441 ttctcagtag ctgccagctg atcccaccgc accccactca atgttgatat tcacagtcct
     4501 ccctcccccc aatacggcat gctggagttt gctggattct tccctgggag ggtgatgtct
     4561 cctaactaga ttagacagga gccttcattc tgtggcttgt tgtcatttgg gaactattta
     4621 tttatttttt ttaatattta agttttaaca tcctcaggga ccaggggcct cttgctttcc
     4681 agaggtccaa gtgcatttat cccaaaataa ggcacctttt tggcatcccc aagccctccc
     4741 ccagttccat ggccctgggg tcccttacct tgtggctctt ggccgcagga atgacagaaa
     4801 ctgatcgggc tgggaaggcg gggagtgtta tcagtcacag gaagccagca gatgtgggtg
     4861 aggtcaaagg caggtctctg tcctgccttt tctgtacttt caaatgctcg agggagttgg
     4921 caagaggcca gaattctagt tttggttatc agcctcgatt ctggcttgaa gaaaccatat
     4981 ttggcttgga attactgaag ggttggaatg ttctagagtc cccttcgctt tccagttcag
     5041 taggggccta aagccacttt tctgatatca tcacttaatt ttagttgtac aaaagagagt
     5101 cttaagtgac cgtgtgtctg actgtttaga atgttagtaa ggagcggaaa tagcctacag
     5161 cccgttggga attggaaata gagatggggt tttgttttga agctgtagac tattgggtat
     5221 ttcttacatt catttacaca ttagtatggt tctatgagag agctgcgggt ggaaataaca
     5281 aacctgtccc cctagatacc tagacagtta ccttaacctt cagtttcccc ggtttgtttc
     5341 cttcataggc ttctatcagc tcgaagtccc gggattacaa aaatgtggta ccctctagaa
     5401 gcaggagggc aacaagttta ggatctcttc taaatcactt ctataacgcg tgccttcaca
     5461 gctcagcccc aaagtgccac ttaggtttcc caaggttctt ttctatttaa accatatctg
     5521 gctcaggccc cttggtggac aggtgatagc agccacatga gatccttcag ccacatgaga
     5581 ctcctctgct cagtggtacc aactaatcct tagaaatctt aattaaaaac agcaaaaaag
     5641 caagaacttt tctaagttca cagagaccag atgactatag ccggggtggg ggtgggggga
     5701 taaagatggt acctttaggt agtgatccca ccagacactg ttttagaggg gcccatgctc
     5761 cagcgcgccc gtgtggaaac tgaactagtt caaagcggag atgcacgtgc ggccggaggc
     5821 tggcgcaggc gcgtccttac tggtgctttc tcgtacgaac acactgggct tggcttttgt
     5881 tgttctttct attcagagct ccctgtttga caataacgtc cctatacagt gtcaccctgc
     5941 ctgtccccca gcttccacct gcattcagag aaggccatga cactgaccgt gcctgtgttc
     6001 tgggccatct ctgaggtctc ttgccctcac tgctgtcctc caagccttca gcagccccct
     6061 tagagctaaa gtacccaccc acccaccgtc cttgccgccc cacctcccac cccggcacag
     6121 aggccctgtg ctcatgatgt ctaaagggat tgcctatatt taactgcctc agtcacccaa
     6181 cctctttctt ctcatgtgcc agatgttaaa gacagaggag gaagagtgca atagtactca
     6241 agcctcagct gttgaaatgt ttttattggg gctcactgtt ctgggttatt atttattact
     6301 agactggcaa agcctaaccc cttaggtttt tacaggaagt atgcatattt ttatataaaa
     6361 acagttgtgt ctaacccaca tttggctgtg tttgttgcct caaaaaaaaa aaaattgcag
     6421 ctgttagaac ttttcctcat ttgtctctta cgttaaaggc cttgctggag aggatggagc
     6481 acagaacagc cttgacagtc tgtaattagt gtacaaatat tttaatagca taaagtaagt
     6541 atattccttt tattttgaaa caaaatggtc agacactgcc tttcatgtgt ttgttgcctg
     6601 tggcactctt tttaaaaaag actgttacat attaaaatag tgtacatata tatatatata
     6661 taaatataaa tattacctct ttgtgtacag ttgtgataga ccagactgaa aattttattt
     6721 tttgtgtgct ttttataaaa aaaaaattaa tacactaaag agaatcttgc tgtgattgta
     6781 atgtacctat gtaacttatt tacttttgaa tgttctgtat cttaagacct tttattaaat
     6841 aaggttttaa aaaaaa
//
