LOCUS       NM_173771               1770 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus MGAT4 family, member F (Mgat4f), mRNA.
ACCESSION   NM_173771
VERSION     NM_173771.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   3  (bases 1 to 1770)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK030161.1, BC116694.1 and AV283550.1.
            
            On May 19, 2009 this sequence version replaced NM_173771.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK030161.1, BB616964.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-427               AK030161.1         2-428
            428-1763            BC116694.1         101-1436
            1764-1770           AV283550.1         173-179
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 58.21 cM"
     gene            1..1770
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /note="MGAT4 family, member F"
                     /db_xref="GeneID:240755"
                     /db_xref="MGI:MGI:3045320"
     exon            1..288
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             279..1718
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /codon_start=1
                     /product="uncharacterized protein LOC240755"
                     /protein_id="NP_776132.2"
                     /db_xref="CCDS:CCDS15307.2"
                     /db_xref="GeneID:240755"
                     /db_xref="MGI:MGI:3045320"
                     /translation="MPKTAPGAMRGCLWMCVRVLASLVILGFFLQDNIAAAHVKQQHN
                     TLLSEKKKMIQQIAQEEISSKIKNHLKYFTEMQESSHVLQHVTYTVLAGASYQPKRML
                     TVGIFSVPHSHRTHLLDTMTSLFQASSEQDLEYMLVLVLLSDTDPTWLNQTVANISGL
                     FMPHIDSGRLLVVHGRLGGSRAKSRNDTSPCGKLYSRQKTSLALLMNFALNLSEYFLL
                     LGDNVKTAPKFLANVFWALPAWKQLPWVSLDFSSMPLSGKVFHTEDLSRFVSFLLLFP
                     KDIPTHLLLSEFRLLLSQNVPIRLSPSVFYRMDRDSEFEDTCFPAKRDKDLGRPDNPA
                     GTVFTDMISFWNTNPQFAYFLNDDYFWALDPLEGNYLLVVLDKPQKVIKVAVETGSTK
                     NRLNLLKHGQLLLGYSPMEYPQRCAHYNLVGPLVRGQLEQMVFYEEDAVMEISCIKLL
                     VTSSHDYPVRIMQIKVWTKVEDEESWRLL"
     exon            289..419
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            420..576
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            577..1770
                     /gene="Mgat4f"
                     /gene_synonym="4933406M09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actctgggac tgcatccctc aacattaagt tgttttcttc ttgttttcag agaaaatcct
       61 tattccagtt aagcttcaag cagcattttc tactagccag aaagacttct atggaaattg
      121 cactcaaaac ataatgatga tgtggtcctg tttaggaatt tctggtttct ttcaggtttc
      181 tatggatcct agcagttcac aatgaagaaa gcacgccaag tccttctgta tttattcaaa
      241 accttgtcta tctacctaac aaaatcccag aaaggaaaat gcccaaaact gctcctggtg
      301 ccatgcgagg ctgcctgtgg atgtgcgtcc gagtcctggc atccctagtc atcctggggt
      361 tctttcttca agacaatatc gcagcagcac atgtaaagca gcaacataac acattgctga
      421 gtgaaaagaa gaaaatgatt cagcagatag ctcaggagga aatcagctcc aaaatcaaga
      481 accatttgaa atacttcaca gagatgcagg aaagttccca tgttctccag catgtcacct
      541 acacagttct ggctggagcc tcttaccagc caaagaggat gctgacggtg ggcatcttct
      601 cagtgccaca tagccacagg actcacctct tggacaccat gacatccttg ttccaagctt
      661 cctcggaaca ggacctggag tatatgctgg tcttggtcct cctgtcagac actgacccca
      721 catggctcaa ccaaacagtt gccaacattt caggtctttt catgcctcac attgactctg
      781 ggaggctgct ggtggtccat ggtcggcttg gtggctccag agcaaagagc agaaatgata
      841 cctccccctg tggaaaacta tattctaggc aaaaaacaag tcttgccctt ctcatgaatt
      901 ttgccctcaa cctctctgaa tacttcctgt tgctaggaga taatgtgaag actgccccca
      961 agtttctggc taatgtcttc tgggccttgc cggcctggaa acagctccct tgggtgagcc
     1021 tagacttctc cagcatgccg ctctccggaa aggttttcca tactgaggac ctttcccgct
     1081 tcgtttcctt cttgctcctc ttccccaagg acattcccac tcacttgctt ctctctgagt
     1141 tcaggcttct cttgtctcaa aatgtcccta tccgcctcag tccctccgtc ttctaccgaa
     1201 tggacaggga ctctgagttt gaagacacat gctttcctgc gaagcgagac aaagacttgg
     1261 gcagaccaga caatcctgct gggactgtct ttacagacat gatctcgttt tggaatacaa
     1321 atccacagtt tgcctacttt ctcaatgatg actacttctg ggccttggac cctctagaag
     1381 gcaactactt gctggtggtt ctagataagc cacaaaaagt catcaaggta gcagtggaga
     1441 caggctctac taagaatagg ttgaacttat taaaacatgg gcaactatta ctgggctaca
     1501 gccccatgga atacccccaa cgctgtgctc attataactt ggtaggacca ttggtgagag
     1561 gtcagttgga gcagatggta ttttatgaag aagatgctgt gatggagatt agttgtataa
     1621 aattgctggt gacatcatct catgactacc ccgtcaggat catgcagatc aaagtctgga
     1681 caaaagtgga ggacgaggag agttggaggc tactgtaaga tttctataag acagggtcta
     1741 ggaagggaga aataaagcca tcgaatgacc
//
