LOCUS       NM_001145300            1735 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus MGAT4 family, member E (Mgat4e), transcript variant 1,
            mRNA.
ACCESSION   NM_001145300 XM_006529874 XR_033519 XR_033559
VERSION     NM_001145300.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
            Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
            Abuin,A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122771.10.
            
            On or before Mar 21, 2014 this sequence version replaced
            XM_006529874.1, NM_001145300.1.
            
            Transcript Variant: This variant (1) represents the shorter
            transcript and encodes the longer isoform (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016512.1, BY716191.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-210               AC122771.10        124612-124821
            211-510             AC122771.10        127111-127410
            511-1735            AC122771.10        132129-133353
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 58.24 cM"
     gene            1..1735
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /note="MGAT4 family, member E"
                     /db_xref="GeneID:71001"
                     /db_xref="MGI:MGI:1918251"
     exon            1..210
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            211..510
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            511..1735
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1710..1715
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1727
                     /gene="Mgat4e"
                     /gene_synonym="4931440L10Rik"
                     /note="major polyA site"
ORIGIN      
        1 agaatagtaa catcacagag ggagctgagc tcaggggagt aagcagcaga gacctcaggc
       61 tctgtcccta attcctagag tgacctgctc cctttccagc tcctcttgcc ctttgttctg
      121 ccttctacag aacagcgttg accttcgagg gttaagaaaa gaattctctg ctgcccaaca
      181 ctgtcacagg caggacagaa gtgaactgag aagccgtatc ccagtgcaga cgcaatgcac
      241 tgctctgtca ggacttgctt cagagcctct gtggccctca tattcctgtg gctcttcacc
      301 atcctgcaaa tccctgagga aaatgaagat gtcaaaaatg tggtgactat tctctgggaa
      361 actggaagtg catggaggga ggactgagga caggcaggct gcccaaggcc cctgagcttt
      421 ccctccaaag ctttccctct gagtggagct gggtgtggac ctacccatta ttccataaac
      481 tagctgcatt tgcttgtcac gcttctcaag catggctgac agtggggatc acctcagagt
      541 cacgagaggg tccaaatggc ctcttggata cactggcctc cctgtaccac acctcctcca
      601 catccgagca gaaacaaatg acagtgctgg tccacctggc tgactctgat cccacctggc
      661 tcaggagaac tatcatccgg atttcaagtc tctacaggtc ccagatcttg acagggcaat
      721 tgttactgat ccacgcccca cctgatgcct accccgctgt gaacgatgcc cagaacaagg
      781 tctctcgggg gcagatctac tccaagcaga atgtagacca tgccttccta atgagctttg
      841 ccacgaaact ctccacttac ttcctcttga tagaggacaa tgtcttttgt gcccccaatt
      901 ttgtcaacca cattcgctcg aaggtgggct acaggaagcc caacacatgg gtgctcctcg
      961 agttctctaa tatgggcttc ctgggcaaac ttctccacag cagggacctt ccactcctgg
     1021 cccacttcct cctcctcttc cacaaggagc gacctctcaa ctggctgctc cttcacttcc
     1081 gcaccctcct gggccagcaa agttcaatcc tctgccgacc atttctcttt taccacaggt
     1141 tgactcacct cacttttgag aacaagacct taataggcca tgaaaaggat cctcctgatc
     1201 cgtataccct cagtggaact gtttacacgg atatgaggtt ctctgatacc cactccccgc
     1261 aggaggccta tactctggat gagtcgttct tctggtccta caatgtcact acagggaact
     1321 atttgacagt gattttgaac aatccagcga acctcaacag agtgcaagta agaacgggct
     1381 ccatcacgga tggaaagtac atcctagaaa aaggacaggt ggagctaggc tatgatcctg
     1441 aaggaacacc gccacaatgc accagcttta ccctgctggg ccggcttgtg caagggcaga
     1501 tggatcagtt cattctggaa agcattgggt ataaagtaag ctgcgtgaag ctggcagtga
     1561 acgctaatca ggtcggtggt ctcatgatca ggcatatcta catctggggg gaaaatgcca
     1621 aaaacagaaa agatgtccaa attgacaacg atgacgatga cgacgacgat gactacgacg
     1681 acgatagttg atgtatcagc gtatgaacaa ttaaaagctc aaaccagttc atcta
//
