LOCUS       NM_026233               1292 bp    mRNA    linear   ROD 07-FEB-2025
DEFINITION  Mus musculus MGAT4 family, member C (Mgat4d), mRNA.
ACCESSION   NM_026233 XM_906935
VERSION     NM_026233.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Akintayo,A., Liang,M., Bartholdy,B., Batista,F., Aguilan,J.,
            Prendergast,J., Sabrin,A., Sundaram,S. and Stanley,P.
  TITLE     The Golgi Glycoprotein MGAT4D is an Intrinsic Protector of
            Testicular Germ Cells From Mild Heat Stress
  JOURNAL   Sci Rep 10 (1), 2135 (2020)
   PUBMED   32034218
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1292)
  AUTHORS   Lu,Y., Oura,S., Matsumura,T., Oji,A., Sakurai,N., Fujihara,Y.,
            Shimada,K., Miyata,H., Tobita,T., Noda,T., Castaneda,J.M.,
            Kiyozumi,D., Zhang,Q., Larasati,T., Young,S.A.M., Kodani,M.,
            Huddleston,C.A., Robertson,M.J., Coarfa,C., Isotani,A.,
            Aitken,R.J., Okabe,M., Matzuk,M.M., Garcia,T.X. and Ikawa,M.
  TITLE     CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched
            genes dispensable for male fertility in micedagger
  JOURNAL   Biol Reprod 101 (2), 501-511 (2019)
   PUBMED   31201419
REFERENCE   4  (bases 1 to 1292)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   5  (bases 1 to 1292)
  AUTHORS   Huang,H.H. and Stanley,P.
  TITLE     A testis-specific regulator of complex and hybrid N-glycan
            synthesis
  JOURNAL   J Cell Biol 190 (5), 893-910 (2010)
   PUBMED   20805325
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK016272.1 and AC155304.4.
            
            On Dec 27, 2006 this sequence version replaced NM_026233.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016272.1, SRR5189685.174595.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                AK016272.1         10-34
            26-26               AC155304.4         129954-129954       c
            27-509              AK016272.1         36-518
            510-510             AC155304.4         120325-120325       c
            511-1292            AK016272.1         520-1301
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 39.84 cM"
     gene            1..1292
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /note="MGAT4 family, member C"
                     /db_xref="GeneID:67555"
                     /db_xref="MGI:MGI:1914805"
     exon            1..107
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..1135
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /note="GlcNAcT-I inhibitory protein; glycosyltransferase
                     54 domain-containing protein;
                     alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein
                     MGAT4D; N-acetylglucosaminyltransferase MGAT1 inhibitory
                     protein"
                     /codon_start=1
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
                     precursor"
                     /protein_id="NP_080509.2"
                     /db_xref="CCDS:CCDS22451.1"
                     /db_xref="GeneID:67555"
                     /db_xref="MGI:MGI:1914805"
                     /translation="MKAKNVNLLFAFVAVLLFGFSCFCISRMNQTNNQLINCRNHVLE
                     FKEIMLRLKNKSENHHQDLMQVLYQMKRKAAHTTRSSGNFLEKKGSILSQHETLPNQF
                     EVLKYFLPHLRTAGKLYPAIATSKGRAGVSFALGISTINRGNHTYLKQTLTSVLSRMT
                     PEEEEDSVVIVSVADTDESYLKSVVRMVKTKFRKQVQSGVLEVISIPTLFYPQTLLDK
                     KTKTDSESWQIKQVLDFCILMLYAQPKATYYLQLEDDIVAKKMYFTKMKDFVNSLTSK
                     NWFFIEFSVLGFIGKLFRSKDLTDFVHFFLMFYETKPIDILLDDIFLIRVCISGEPVR
                     SCLQRKKGFRIQYRPSLFQHVGTQSSFPGREQHLKDNYY"
     exon            108..266
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            267..404
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            405..538
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            539..585
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            586..690
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            691..766
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            767..881
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            882..1012
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            1013..1120
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1292
                     /gene="Mgat4d"
                     /gene_synonym="4933434I20Rik; GnT1IP; GnT1IP-L"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgacgctgcc acgatgaagg ccaagaacgt taacttgctc ttcgccttcg ttgccgtcct
       61 gctctttggt ttctcgtgtt tctgcatctc caggatgaac caaaccaata atcaactaat
      121 taactgcaga aaccacgttt tggagtttaa agaaattatg ctccgtttaa aaaacaaaag
      181 tgaaaatcat caccaagacc taatgcaagt cttgtatcaa atgaagcgta aagctgccca
      241 cacaacaaga tcatcaggga acttccttga gaagaagggg agcatattga gtcagcatga
      301 aacacttcct aaccaatttg aagtcttaaa gtacttcctt cctcatctaa ggacagcagg
      361 gaaactttac ccagctatag ccactagcaa agggagagca ggcgtttcct ttgcactggg
      421 aatctccacc attaacagag ggaaccacac ctacctgaag caaacgctga cctctgttct
      481 ctccagaatg actcccgaag aagaggagga ctctgtggtg atcgtctctg tcgctgatac
      541 tgatgaaagt tatttaaaat ctgttgttcg catggttaaa accaaattca gaaagcaagt
      601 gcagtccggc gtcttggagg tcatttcaat acccaccctt ttttatcctc aaacattact
      661 ggacaagaaa acgaagacgg actcagaaag ttggcaaata aaacaagtat tggacttctg
      721 tattctgatg ctgtatgccc agcccaaggc cacgtattat ttacagctag aagatgatat
      781 cgtagcaaaa aagatgtatt ttacaaaaat gaaagatttt gtaaatagtc tcacttcaaa
      841 aaattggttt tttattgagt tttcagtcct tggatttata gggaaactct ttcgatcgaa
      901 ggacctcact gactttgtgc attttttcct gatgttctat gagacaaagc ccatagatat
      961 acttttagat gacattttcc tgatccgggt gtgcatctca ggggagcctg ttaggagctg
     1021 tttgcagcga aagaagggat ttcgaattca gtacagacca tctctgttcc agcatgtggg
     1081 cactcagtca tcatttccag gacgagaaca gcacctcaag gataattatt actaggattt
     1141 cttaaatttt acaacttctt taaaaattac cagactcatt tttggaaaaa aggcacagca
     1201 aatatcaaat tttctcaact aatactaaag aagagactac attatttatt ttttaaatta
     1261 agccttcaat aataaagtga gtatacaaat tt
//
