LOCUS       NM_133680               3472 bp    mRNA    linear   ROD 20-DEC-2022
DEFINITION  Mus musculus major facilitator superfamily domain containing 14B
            (Mfsd14b), transcript variant 1, mRNA.
ACCESSION   NM_133680
VERSION     NM_133680.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco
            G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T,
            Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T,
            Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ,
            Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A,
            Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso
            J, Hide W and Ko MS.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY152935.1, AK146596.1, BY740089.1, CN709077.1 and BG063674.2.
            
            [WARNING] On Apr 17, 2023 this sequence was replaced by
            NM_133680.4.
            
            On Apr 6, 2007 this sequence version replaced NM_133680.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC033469.1, SRR13422597.1245471.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-14                BY152935.1         2-15
            15-29               AK146596.1         7-21
            30-324              BY740089.1         1-295
            325-985             AK146596.1         221-881
            986-986             CN709077.1         315-315
            987-3356            AK146596.1         883-3252
            3357-3472           BG063674.2         1-116               c
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     gene            1..3472
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /note="major facilitator superfamily domain containing
                     14B"
                     /db_xref="GeneID:66631"
                     /db_xref="MGI:MGI:1913881"
     exon            1..479
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             366..1889
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /note="hippocampus abundant transcript-like 1"
                     /codon_start=1
                     /product="hippocampus abundant transcript-like protein 1"
                     /protein_id="NP_598441.3"
                     /db_xref="CCDS:CCDS26603.2"
                     /db_xref="GeneID:66631"
                     /db_xref="MGI:MGI:1913881"
                     /translation="MSTDGESPEEPRWKAVASPKASTMPEKRGSAQAASGSWLQGFGH
                     PSVYHAAFVIFLEFFAWGLLTTPMLTVLHETFPQHTFLMNGLIQGVKGLLSFLSAPLI
                     GALSDVWGRKPFLLGTVFFTCFPIPLMRINPWWYFGMISVSGVFSVTFSVIFAYVADF
                     TQEHERSTAYGWVSATFAASLVSSPAIGTYLSANYGDSLVVLVATLVALLDICFILIA
                     VPESLSEKIRPASWGAQISWKQADPFASLKKVGKDSTVLLICITVFLSYLPEAGQYSS
                     FFLYLRQVIGFGSVKIVAFIAMVGILSIVAQTVFLSKLMRSLGNKNTVLLGLGFQMLQ
                     LAWYGFGSQAWMMWAAGTVAAMSSITFPAVSALISRNAESDQQGVAQGIVTGIRGLCN
                     GLGPALYGFIFYMFHVELSELGPKLNSDDDPLQGAFIPGPPFLFGACIVLMSFLVALF
                     IPEYRKTSGVQKHNNSTSGSLSTPPERGSDEDIEPLLQDSSIWELSFEEPGNQCTEL"
     exon            480..575
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            576..638
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            639..766
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            767..881
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            882..1100
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1214
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1215..1286
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1287..1399
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1400..1497
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1498..1640
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..3472
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3335..3340
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /note="putative"
     polyA_site      3356
                     /gene="Mfsd14b"
                     /gene_synonym="5730414C17Rik; Hiatl1"
                     /note="putative"
ORIGIN      
        1 gcagtctggg cggagcttgc ccgagcttct ggagaggggt gggcgttcta ggcgggagct
       61 gcctttgctg agttctccgg gcgggacgcc gtctcccgac tgttcgggcg ctactgaaaa
      121 ctactcactg ccagtgtcgg ggtcctgtgt tcacgaccac cactgaatag ttgagggccc
      181 tgttcgcttc ctgcacggat ccagcctcgg cgtcctctca gcagccggtg tcgccactgg
      241 cgccgccgcc cgagcggcag gccgctgcgg atcgcggagc ccatgaaggc tcgggccccg
      301 ccgccgcagt ggcggcgtcg ccagtgtctt ggagcgctcc gaacctgctc tggcatgacg
      361 gcggcatgag cacggacggg gagtcgccgg aggagccgag gtggaaggcg gtggcctcac
      421 ccaaggcgtc aaccatgcct gagaagcgcg ggagcgctca ggccgcgagc ggcagctggc
      481 tacaaggttt tggccaccca agtgtttacc atgctgcttt tgtcatcttc ttggaattct
      541 ttgcgtgggg cctgttaaca actccaatgt tgactgtttt acatgaaaca tttcctcaac
      601 acacattcct catgaatggg ctcattcaag gtgtaaaggg cctgctctct tttctgagtg
      661 ctccgctcat aggcgctctc tctgatgttt ggggcaggaa gccctttctc cttggcacgg
      721 tcttctttac ctgcttccct atcccactaa tgaggattaa cccatggtgg tattttggca
      781 tgatttctgt atctggagtc ttctcagtca ctttctctgt aatttttgcc tatgtagctg
      841 acttcactca agagcatgaa agaagtactg cttatggctg ggtctcagcc acctttgcag
      901 ctagtctggt tagcagccca gccattggga catacctctc tgcaaactat ggagacagtc
      961 ttgttgtgct agtagccaca ctggtggctc tcctagacat ctgcttcatt ttgatagcag
     1021 ttccggaatc tctatcggag aaaattagac ctgcttcctg gggagctcag atctcttgga
     1081 aacaagcgga cccttttgcg tcattaaaga aagttggaaa agattctact gtcttactga
     1141 tctgcatcac agtgtttctc tcatatcttc ctgaagctgg gcaatattca agcttttttc
     1201 tctatctcag gcaggttata ggttttggat ctgtgaaaat tgtagcattc atagctatgg
     1261 taggaattct gtccattgtg gctcagacag tcttccttag caaattgatg agatcactag
     1321 ggaataagaa cactgttctc cttggtttgg gttttcagat gctccagctt gcctggtatg
     1381 gttttggatc tcaggcctgg atgatgtggg cagcaggaac tgtggctgcc atgtccagca
     1441 ttacattccc agcagtcagt gccctcatct ctcggaatgc agagtcagat cagcaagggg
     1501 ttgcccaggg gatcgtaact ggaatacgag ggctgtgcaa tggcctaggg ccagcattat
     1561 atggcttcat attctacatg ttccatgttg aactgagtga gttgggccca aaattgaatt
     1621 ctgatgatga tcccttacag ggagctttca tcccaggccc accattttta tttggagcat
     1681 gtatagttct tatgtctttt ttggttgcct tattcatccc tgaataccgt aaaaccagtg
     1741 gagttcaaaa acataacaac agcaccagtg gcagcctaag cacaccccct gaacggggca
     1801 gtgatgagga cattgagcca ttactacaag acagcagcat ctgggagctt tcctttgaag
     1861 agcctggaaa tcagtgcact gagctataac ccagtagtaa tggagattct gcagacacca
     1921 tctctgagag ccatagagga agctgcacca cgtggagact tcatggtgct ggaggggcga
     1981 tgctagcagc atcctttggg ccacgtttaa taagttattc ttcccatacc tctgcccttc
     2041 actcttctgt ctctctctgt tcttttattc ccattctttt ttttttcttt ctttcttttt
     2101 ttatatatat attctaggaa agattgaaaa ttcttcaaga ttatttagaa tctagacttt
     2161 aaaactttaa tagaaaaatc atgttggtgg taggaaaggt ggtcggtctt tcccttcagt
     2221 aactagaata agagtgacag atatttttct gtcttttttg gtagaagatt gggacagtag
     2281 tgttaactgc ctcctttcat tgtctttttg tgaatcattc cctcttagtc tataaatgtt
     2341 gatgagttga taagaatcac atggtatcag ggatctactg aatttgtcca gaggttagat
     2401 gaaaaccagt tttgctttcc ctttgttttc tctacttctt aagcttctca aaaatgaaca
     2461 ttattaatat tgatcagtgc tcacatttat cagataaagg aaatctttct tagaaaattt
     2521 aagttatgtt gaacaagcag ctcagattct taaactttgt gtcctgattg aggttagcct
     2581 tggcaacata ctaagagcct aagcatatct caaggcaaaa caaccaacca tgaagctttc
     2641 tagtggcaac aaggaaatca gagaatactt caggaaaagt tttctgttta ttattttgtt
     2701 ttaaaatttt aaatattcct aaaaggggag agagtaagat agcagtgttt atttttaagt
     2761 tcatactcac atgttactgt atgctcttcc ccgtgtctct ttgtcctact tctgtttctg
     2821 taccatattc ctgccttaac tgttaatgta gaatgtgttt gtttttgact aatctgtatc
     2881 ttggtatgtt tttccgaatc ccataggaat gcgcacatca aattcctttc taaaatatga
     2941 gggttagtgg agctcagttt catgataagt gtcttgctaa tttttgaggt gttttatgga
     3001 caaagaaaac tacagatttt atattttgct gcatagtaaa tggactatta atttgggtct
     3061 atcttcaaca aagtactcct ttgaaagttt tataggtatg aaaacatgta gatatttgta
     3121 aggattttaa ttttttttga tggggtgctg tgtaaatctt gtatttataa ataatgaagg
     3181 tattgacaga aaatatatac aacttttata agggatcata tattgactga atacatttaa
     3241 aggaaaatat attttgaagc ctgttctgcc atgaacagat ataacatatc tttttactat
     3301 gctgttggtt tttaggttaa gcttcctaat gcataataaa ttttcaatgg atacttatat
     3361 ggcttaaaaa caatttctgt cattgctctt ttgggttctt ttgggggggg tggctatcca
     3421 cacaactgag ttagtaatct ttcaactaat taaaaaatgg ttttaaaaaa tg
//
