LOCUS       NM_001374644            1916 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus major facilitator superfamily domain containing 13B
            (Mfsd13b), transcript variant 1, mRNA.
ACCESSION   NM_001374644 XM_030243040
VERSION     NM_001374644.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122248.5.
            
            On Oct 8, 2019 this sequence version replaced XM_030243040.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.210335.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-222               AC122248.5         153880-154101
            223-384             AC122248.5         156375-156536
            385-560             AC122248.5         160331-160506
            561-1283            AC122248.5         162559-163281
            1284-1438           AC122248.5         166751-166905
            1439-1522           AC122248.5         170272-170355
            1523-1645           AC122248.5         171466-171588
            1646-1916           AC122248.5         185888-186158
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 65.06 cM"
     gene            1..1916
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /note="major facilitator superfamily domain containing
                     13B"
                     /db_xref="GeneID:74466"
                     /db_xref="MGI:MGI:1921716"
     exon            1..222
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            223..384
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            385..560
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             411..1778
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC74466 isoform 1"
                     /protein_id="NP_001361573.1"
                     /db_xref="CCDS:CCDS90323.1"
                     /db_xref="GeneID:74466"
                     /db_xref="MGI:MGI:1921716"
                     /translation="MTLLSIKSEVWVYSLITLGTEMLSSFFSFYYVKLFLEVYKISKS
                     AFCQAQVILMIWNILTDLSGYFHMSSQYDCCLSYRCSLLGALLHAVAFLLPWFPWKHY
                     RESDWLIGLQLVASLCAFDSTHAWVQQAQWRLFAETSPRQESRLQLTRINQVASLVGS
                     VSILFCGLISHNMEILPNFQATSVAIAFLASLSFYSGMFNVRQFEFKRNPEENVLSES
                     EQELARTSVILLMRQILSQRNFYLFLIMNFFQVFHLTIFSNFMMIFVDNLIPTEALSS
                     SVRSIMYGAGFICPQCLVLLGQSWLKKYGYYKVILISFYLEGAAALVMLLLGQEHYYC
                     LAVYLTVIMVIVHTSLCLFNLPVADMVEADLPKFNRQPPFSLMVAVISALFTRPAQSL
                     APMLILSKLNQHEHGEANNRRLLDLQDSMFNSVCVVSLGIATVQILTWSSFSVRNRRD
                     CSGTV"
     exon            561..1283
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1284..1438
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1439..1522
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..1645
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1646..1916
                     /gene="Mfsd13b"
                     /gene_synonym="4933427G17Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctgcgtcg cgtctcctca gttgagtgca ctccagttcc ggagtgtgga ggtggctttg
       61 gcgaacaccg ggtgccgagg actactaatt ctgggcacgg gtcatcatct tcccacccga
      121 gggtttcgga tgcgggccaa ctctccttgg ctctgccctc ggtgatgctc ggagggagac
      181 tcatggtccg tcgggaagtt aaagccgaga gaacgctact gaatgctatt ttcagagacc
      241 attttttgtg tatgttctgc aaaaccctca acaaaaactg tactgagaaa gaccttgcaa
      301 gcaaaaagct ctgccttgga agtgtctcca tgaggcaatc ataaatggca gctgcagtga
      361 tgataaccat tggcttagaa gcagggatga aaacgtcctc tgcatgaaaa atgacccttt
      421 taagtatcaa atctgaagtc tgggtgtact ctctgattac actaggaact gaaatgttaa
      481 gttctttctt cagtttctac tatgtgaaac ttttcttgga ggtatacaag atttccaagt
      541 cggccttctg ccaggcccag gtaattttaa tgatatggaa tatcctgact gacctgagtg
      601 ggtatttcca catgagctct cagtatgact gctgtctcag ttaccgttgc tccctgcttg
      661 gagcccttct gcacgcagtg gccttcttgc tcccttggtt cccttggaaa cactatagag
      721 aaagtgactg gcttattgga ctccagctgg tagcctccct gtgcgcattt gacagcaccc
      781 acgcctgggt gcagcaagcc cagtggcgcc tgtttgcaga gacttccccc aggcaggaga
      841 gcaggctgca gctgaccaga attaaccaag tggcatccct ggtgggctcc gtcagcatcc
      901 ttttctgtgg cctcatctct cacaacatgg aaatcctgcc caattttcaa gccacgtctg
      961 tcgccattgc cttcctggca tctctcagct tttacagtgg catgttcaat gtgagacagt
     1021 ttgagtttaa aagaaaccca gaggaaaacg tcctctccga gagcgaacag gagttggcaa
     1081 ggacctccgt catcttactg atgagacaaa tcttgtctca gaggaacttc taccttttcc
     1141 tcatcatgaa tttcttccag gtcttccatt tgaccatctt cagtaacttc atgatgatct
     1201 ttgtcgataa cctcattccc actgaggctc tctcttcttc cgtaaggagc atcatgtatg
     1261 gagcaggctt catctgccct cagtgcctgg tacttctagg tcagtcctgg ctgaagaaat
     1321 acggttatta taaggttatc ttaatttctt tctacctaga aggggcagcc gcccttgtca
     1381 tgttacttct gggacaggaa cactattact gtttggctgt ttatctcact gttatcatgg
     1441 tgattgtaca tacctctctt tgcttattta atttgccagt ggcggacatg gttgaagcag
     1501 atttaccgaa gtttaacagg cagcctcctt tttccttgat ggttgctgtc atcagtgctt
     1561 tatttaccag acctgcccag tcgttagctc ccatgttgat actgtctaag ctaaaccagc
     1621 atgagcatgg agaggcgaac aacagaagac ttttagatct tcaggacagc atgtttaatt
     1681 cggtctgtgt ggtctccctg ggcatcgcga cagtgcagat tttgacttgg agctccttct
     1741 ccgtcaggaa cagaagagac tgctcaggga cggtgtaagc atagagcctg tgccaccact
     1801 tcaagtgctt gtcatgtcct ccaggttatg ctgtgctcaa gggcgctctc agaaacattc
     1861 tttataccct ctcatttgtt taaaatccag agcaaataaa gtaaaacccg acagcg
//
