LOCUS       NM_026220               3419 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus microfibrillar-associated protein 1A (Mfap1a), mRNA.
ACCESSION   NM_026220 XM_987612 XM_987645 XM_987683 XM_987721 XM_987757
VERSION     NM_026220.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3419)
  AUTHORS   Naba,A., Clauser,K.R., Mani,D.R., Carr,S.A. and Hynes,R.O.
  TITLE     Quantitative proteomic profiling of the extracellular matrix of
            pancreatic islets during the angiogenic switch and insulinoma
            progression
  JOURNAL   Sci Rep 7, 40495 (2017)
   PUBMED   28071719
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3419)
  AUTHORS   Combes,A.N., Lesieur,E., Harley,V.R., Sinclair,A.H., Little,M.H.,
            Wilhelm,D. and Koopman,P.
  TITLE     Three-dimensional visualization of testis cord morphogenesis, a
            novel tubulogenic mechanism in development
  JOURNAL   Dev Dyn 238 (5), 1033-1041 (2009)
   PUBMED   19334288
REFERENCE   3  (bases 1 to 3419)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
REFERENCE   4  (bases 1 to 3419)
  AUTHORS   Shu,H., Chen,S., Bi,Q., Mumby,M. and Brekken,D.L.
  TITLE     Identification of phosphoproteins and their phosphorylation sites
            in the WEHI-231 B lymphoma cell line
  JOURNAL   Mol Cell Proteomics 3 (3), 279-286 (2004)
   PUBMED   14729942
REFERENCE   5  (bases 1 to 3419)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK161000.1.
            
            On Apr 5, 2007 this sequence version replaced NM_026220.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK161000.1, AK168801.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3419              AK161000.1         2-3420
FEATURES             Location/Qualifiers
     source          1..3419
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 60.4 cM"
     gene            1..3419
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /note="microfibrillar-associated protein 1A"
                     /db_xref="GeneID:67532"
                     /db_xref="MGI:MGI:1914782"
     exon            1..194
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..1435
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /note="microfibrillar-associated protein 1; spliceosome B
                     complex protein MFAP1A; Microfibrillar-associated protein
                     1B; Spliceosome B complex protein MFAP1B"
                     /codon_start=1
                     /product="microfibrillar-associated protein 1A"
                     /protein_id="NP_080496.1"
                     /db_xref="CCDS:CCDS16648.1"
                     /db_xref="GeneID:67532"
                     /db_xref="MGI:MGI:1914782"
                     /translation="MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKR
                     PDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLA
                     RHRKIVEPEVVGESDSEVEGDAWRLEREDSSEEEEEEIDDEEIERRRGMMRQRAQERK
                     NEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAE
                     ALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEY
                     EAWKVRELKRIKREREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGK
                     YKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYT
                     HLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT"
     exon            195..732
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     exon            733..841
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     exon            842..1002
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1162
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..1252
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..3419
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      3355
                     /gene="Mfap1a"
                     /gene_synonym="4432409M24Rik; Mfap1; Mfap1b"
                     /note="major polyA site"
ORIGIN      
        1 ttctgtcagt tgcgcagctg tgtggggcac agcctgtggg acagggcttt cggctccttg
       61 cttttcgttg ttgggattga gtccgttttg gagagtcccc gcggcagccg tcaccatgtc
      121 ggtcccaagc gcactcatga agcagccgcc catccagtct acggctgggg ccgtcccagt
      181 tcgaaacgag aaaggtgaga tctcaatgga aaaggtgaag gtgaaacgat atgtgtccgg
      241 aaagagacca gattatgccc ctatggagtc ctcagatgaa gaggatgaag aatttcagtt
      301 cattaagaaa gctaaggaac aagaagcaga gcctgaggaa caggaggagg actcatccag
      361 tgacccccga cttcggcggt tacagaaccg catcagtgaa gatgtggaag agcgattggc
      421 tcgacacaga aagatcgtgg aacctgaagt agtgggagag agcgactcag aagtagaagg
      481 ggatgcttgg cgcctggaac gagaagacag cagtgaggaa gaggaggaag agattgacga
      541 tgaagaaatt gagcggcgcc gtggcatgat gcgtcagcga gcacaggaga ggaaaaatga
      601 agagatggaa gtcatggagg tggaagatga agggcgctct ggggaggagt ctgagtcaga
      661 gtctgagtat gaggagtaca cagacagtga ggatgaaatg gagcctcgac ttaagcctgt
      721 cttcattcga aagaaggatc gggtgacagt tcaagaacga gaagctgaag cattgaaaca
      781 gaaggaactg gaacaagaag caaaacgcat ggctgaggag cggcgcaagt acaccctcaa
      841 gattgtagaa gaagagacca agaaagagct agaggagaac aagcggtctc ttgctgccct
      901 ggatgcgctc aatactgatg atgaaaatga cgaggaagaa tacgaggcat ggaaagtccg
      961 cgagctcaaa agaatcaaga gggagagaga agaccgagaa gcgcttgaaa aggagaaagc
     1021 agaaattgaa cgcatgagaa acctgactga ggaagaaagg cgggcagaac ttcgggcaaa
     1081 tggcaaagtc attaccaaca aagctgttaa aggcaaatac aagtttctac agaagtatta
     1141 tcaccgaggt gccttcttca tggatgagga tgaagaagtc tacaagagag actttagtgc
     1201 acctactctt gaggaccatt tcaacaaaac cattcttcct aaagtcatgc aggtcaagaa
     1261 ttttggacgg tctggtcgca ccaagtacac ccaccttgtg gatcaagata ccacttcctt
     1321 tgactctgca tggggccaag agagtgccca gaacacaaaa ttctttaaac aaaaggcagc
     1381 aggggtacga gatgtatttg agcgaccatc tgccaagaag aggaaaacca cctagtcttc
     1441 agcttattcc agctgtggga cacaagggga tctggtcaat tctcttgaac cattatttac
     1501 atggttcttg tatagagctt tccagacttg cggccataac ttgtgtttga aggtgctttc
     1561 taagaggttt ggactcatac cgagaaaccc acagaaaagc actaaccggg taggctagag
     1621 gcttccagct taaaaccact cctgagaaat cttatgtttc tcaccttggc ttcccacatt
     1681 gacttgggac tattctgagt gtttgtctag cctggatcag atacctggac atatggatgg
     1741 atggtgtatt ctttctttct tctttttttc ttttttcttt ttcttttaca ttatttcttc
     1801 cttagggtta ggagtaggct atcaggaaat ccaagctcag tccaacctgt tttccatttg
     1861 tggtgttgaa tcttataaat atacattttg gtgtgtgggt gtgtgtgtgt aagagagaga
     1921 aactgtatac taaaaacatt tttactataa tattagaaac aaaagtctag tccagtgaac
     1981 agagcagcac atgccttcag tccccacacc agaagttagg gacctatgaa gatctctcac
     2041 tccaggccag ccataactac acagtgggcc ctgtctcaaa aagaaaaaag aattgtagta
     2101 actaaaagta gctcggtagg ttacacacac ctgtaatccc aacacttggg aggtagaagc
     2161 aggaaaatga agaattcact catccaaagt ggacatggtg gcagacacct ttaatccctg
     2221 caccaggagg cagagacagg cagatctgag tttaaggcca tccctgtcta cagagtaaga
     2281 tctgggatca ccagaactac acagagacac cttgtctcaa aaaataaaga gttcagtcat
     2341 caatctacat agttcaggac cttcctagac tctataagac agcctaagaa gcaaaacaaa
     2401 aaaaatgtaa aatatagcag ggaaataggc aaattttttt cctccctact agaattggaa
     2461 cccagggcct agaaaataca tgccaagtgt tctactgttg aattatatcc ctagttcttt
     2521 tattttcgtg tgtgtgtgtg tgtgtgtgtg tgttttttaa agtctcacta atctacttac
     2581 gcagttcttg aagttgagaa accctgccta caagtcttag caacctgagt ttgatcctat
     2641 agatgaacat agcagtagat aactcagtct ggcaaccagc aaattgacat ctgacttcca
     2701 tatgtattct atggaatgta tgaattagtg ttcacatgag atgtatttaa aaagcaaagt
     2761 gtaaaaaaaa aaaagaaaaa gccacaagtg tggttgagca cacctttaat ccctgcactg
     2821 gggaggcaga ggcaggtgaa tctctgagtt tgagaccatc ctggtgtaca gagtgagttc
     2881 caggatgccc agggctaaaa cagaaatcct gctttaaaac accaaaaata atgacgataa
     2941 tagtaataaa cttgtgttcc taccactaaa atggggaacc aagtctagga ccttgtatat
     3001 actaggcaag tactgtaaca gattatcttc caggctccta ccagttcata ttttgatcat
     3061 cttttgatct ctgaaacaaa ctcaggcatt agagaataat taagtgtacc cataactttt
     3121 tattctatgt gcaaattcaa atgtttttgg ggtttgtttt gttttgtttt gtttttgaga
     3181 cagggtttct ctgtgtagcc ctggctgtcc tggaactcac tctgtagacc aggctggcct
     3241 cgaactcaga gatccacatg tttttatatc ttagttttta actttccact tgggtgctgg
     3301 gaataaaact tgagtcctct ggaagagaag ccagtgctct taccctctga acaaactcag
     3361 atttatttgg tggtctttgt tctctatctt ctagccttgt gttcaacaat gacttatac
//
