LOCUS       NM_198615               3269 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus mex3 RNA binding family member D (Mex3d), mRNA.
ACCESSION   NM_198615 XM_137153
VERSION     NM_198615.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  AUTHORS   Donnini,M., Lapucci,A., Papucci,L., Witort,E., Jacquier,A.,
            Brewer,G., Nicolin,A., Capaccioli,S. and Schiavone,N.
  TITLE     Identification of TINO: a new evolutionarily conserved BCL-2
            AU-rich element RNA-binding protein
  JOURNAL   J Biol Chem 279 (19), 20154-20166 (2004)
   PUBMED   14769789
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC152062.6, AK149801.1, BC059858.1 and BX514891.1.
            
            On Apr 24, 2007 this sequence version replaced NM_198615.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK149801.1, BI659510.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-484               AC152062.6         49468-49951
            485-1832            AK149801.1         13-1360
            1833-3133           BC059858.1         951-2251
            3134-3269           BX514891.1         2-137               c
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..3269
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /note="mex3 RNA binding family member D"
                     /db_xref="GeneID:237400"
                     /db_xref="MGI:MGI:2681847"
     exon            1..991
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             232..2388
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /note="ring finger (C3HC4 type) and KH domain containing
                     1; RING finger and KH domain-containing protein 1; mex3
                     homolog D"
                     /codon_start=1
                     /product="RNA-binding protein MEX3D"
                     /protein_id="NP_941017.2"
                     /db_xref="CCDS:CCDS48629.1"
                     /db_xref="GeneID:237400"
                     /db_xref="MGI:MGI:2681847"
                     /translation="MPGSTGQPDAGGAGTGTTAGDPGHPHPALAGAEDAAPRPPPEPD
                     DAAAALRLALDQLSALGLGGARPGDEGMATRSADGATECGEDEPAPPDELEVAVAPPV
                     TGAPSMGVGPSMALAPSVTCAPSMALAPSVTSAPSMALAPSVTCAPCMAVAPSVTVAP
                     SMALTPSVTLAPTMAVASSVAPGGLPLLDPDVSPRPSPPDVFASFAPHPAALGPSTLL
                     AEQLNVIGSRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEE
                     PVFIVTGRKEDVEMAKREILSAAEHFSLIRATRSKAGGLSGATPGPPNLPGQTTIQVR
                     VPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAH
                     ITLRTGAFTDSGPDSDFHANGTDVCLDLLGAAASLWAKAPHPGRRPPAATGGLRGDNA
                     LGAASTPEPFYVGSRGGPPLPDPSPSSPYGGSGNGGFTFGGDGPSAPTGTATPEDCDF
                     GFDFLALDLTVPATATIWAPFERAAPLPAFSGCPAVNGAPAQPNTGTRRSSGGGAATT
                     PRHSPTLPEPGGLSLELPLARRSVPDPVGAVPWRPPQSALPPFSGSTTFSTTPSLPST
                     TLASSTLDTVPSEGNHKPSTTAANSSASTAAPGPPSAALARECVVCSEGEAMAALVPC
                     GHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS"
     exon            992..3258
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3234..3239
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /note="hexamer: AATAAA"
     polyA_site      3258
                     /gene="Mex3d"
                     /gene_synonym="Rkhd1"
                     /note="major polyA site"
ORIGIN      
        1 gagcgtcccg tgccaccgcc gccgccgccg ccgccgccgc cgccgcctcg gccgcccagg
       61 agccgccgcc agccctgcca cagcgccacc gccccgcagc cccgcgtccc cgcagcatcc
      121 ccgcgccgcc gtccccgccc cgccgctgga tgccggcggc cggcggccga gctcgcagac
      181 gcggagggcg gcgcgggcgg cggcggcggc gcgggcccga gcgctaaagc catgccgggc
      241 tccaccgggc agcccgacgc gggcggcgcg ggaaccggga ccaccgccgg cgaccccggg
      301 catccgcacc ctgcactcgc gggagccgag gatgccgcgc cccggccgcc acccgagccc
      361 gacgacgcgg ccgctgcgct gcgcctggcg ctggaccagc tgtccgcgct cgggctgggg
      421 ggcgcgcgcc ccggagatga agggatggcg acacgcagcg cggacggggc gacagaatgc
      481 ggagaggatg agcccgcgcc ccccgacgag ctcgaggtgg ccgtggcgcc cccggtgact
      541 ggtgcgccct cgatgggcgt gggaccctcg atggccctgg caccctcggt gacttgtgca
      601 ccctcgatgg ccctggcacc ctcggtgacc agtgcaccct cgatggccct ggcaccctcg
      661 gtgacttgtg caccctgcat ggctgtggca ccctcggtga cggtggcacc ctcaatggca
      721 ctgacaccct cggtgaccct ggcacccacg atggccgtgg cttcttcggt ggcccccggc
      781 gggctgcctc ttttggaccc cgacgtgagc ccccggccat cacccccaga cgtgttcgcc
      841 agcttcgcgc cacacccggc tgccctgggt ccctcgacgc tgctggctga gcagttgaac
      901 gtgatcggga gtcgcaagaa aagcgtgaac atgaccgagt gtgtgccggt gcccagctcg
      961 gagcatgtcg cggagatcgt gggtcgtcag gggtgcaaga tcaaggccct gcgtgccaag
     1021 accaatacct acatcaagac cccagtgcgc ggtgaggagc cggtcttcat cgtgactggg
     1081 cgcaaggagg atgtggagat ggccaagcgg gagatcctgt cggctgctga gcacttctct
     1141 ctaatccgag ccacacgtag caaggcgggc gggctgtcgg gggccactcc aggtccccct
     1201 aacctgccag gccagaccac catccaggtg cgcgtgccct accgagtggt ggggctggtg
     1261 gtggggccta agggcgccac catcaaacgg atccagcaaa ggacgcacac gtacatcgtg
     1321 actcccgggc gcgacaagga accagtgttc gctgtgactg ggatgcccga gaacgttgac
     1381 cgtgcacggg aagagattga ggctcacatc acgctgcgca caggggcctt cactgactcg
     1441 ggtcccgaca gtgacttcca tgccaatggt accgacgtgt gtctagacct gttaggagct
     1501 gcagccagcc tctgggccaa ggccccccac ccaggacgga ggccccccgc ggccaccggc
     1561 ggccttcgag gggataacgc cctgggggca gccagcaccc ctgagccctt ctatgtgggc
     1621 agccgtggag ggccgccact gccggaccca agtcccagca gcccctatgg gggctcaggc
     1681 aatgggggct tcacatttgg tggggacggt cccagtgccc caacggggac agccacccca
     1741 gaggactgtg actttggttt tgacttcctg gcgctagacc tgaccgtgcc tgccacggct
     1801 accatttggg cgcccttcga gagagccgcg cccctgccag ccttcagcgg ctgccccgca
     1861 gttaatgggg cacccgcgca acccaacaca ggcacacggc gcagtagcgg cggcggggcc
     1921 gccaccacgc cgcgccactc acccacgctg ccggagccgg gaggactgag cctggagctg
     1981 ccgctggcgc gtcgaagcgt cccagatcca gtgggtgctg tgccttggcg acccccgcag
     2041 agcgcgctgc cgcctttctc tggcagtacc accttctcca caaccccctc tctgcccagt
     2101 acaaccctgg cgtcctccac cctagacact gtcccctcgg aaggcaacca caagccatct
     2161 accacagcag cgaactcctc tgcgtctacc gcagcccctg gcccaccctc ggcagccttg
     2221 gctcgagagt gtgtggtgtg ttctgaaggt gaggccatgg ctgcgttggt cccctgtggc
     2281 cacaacctct tctgcatgga ttgtgctgtc cgcatctgcg ggaagagtga accagaatgt
     2341 cccgcctgcc gcacgccagc cacccaagcc attcatatct tttcctagtg tacccctact
     2401 tgatggggtg gccctggctt ccccaagcag gagggcctca ggccttgggg tgggagagga
     2461 gggaccgggc aggacttggg gggaaaggtg gggaagtggg gaggttgagg ggcccacgcg
     2521 tgtcgcaaac agctttaact cctgcagcag gcgtcgaggc catcagcttg cggcccagca
     2581 gcagcgcctc cgttcttgac aagtgacagt attgagtgag ccggtgacaa taaaccggaa
     2641 aattctctgt ttgcactttt tattaagacg cccctccccg tttccggggt gatcttaaaa
     2701 caaaaaataa cacgatattt acaactctca ctggatttaa cagtgtggat tcttgtagaa
     2761 acttcaaaag gcaggtggct tccccccacc cccaacacac actccctttt ttgggggcaa
     2821 acatatacca ttttgtacat cagccacggg gtggacaaga ggagggtaat gggagggtat
     2881 ccaagggggg tcccatcgac agatttataa cttgttttat tgtggttgtt ttgttttgtt
     2941 tttaaattaa gactcagtgt tgcggttctt ttttgttgtt ttttaaaaag gtttttaaag
     3001 ttttttttat tgttattttt acttcatact tcctgtgtat atgtagggaa tttatattag
     3061 atatatgtac tttacggaat aaattttaag aactaaaata tattttattt taaataaagc
     3121 aacggacctt taatctttga cagctaaatc actgattata tatttgctga actgatttaa
     3181 gggtttaaaa acattgtatc cagagtttta tttttggact tgaaagcctt cttaataaag
     3241 ttgttttcct atatgtaaaa aaaaaaaaa
//
