LOCUS       NM_025964               3269 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus methyltransferase 21A, HSPA lysine (Mettl21a),
            transcript variant 1, mRNA.
ACCESSION   NM_025964
VERSION     NM_025964.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Li,J., Feng,S., Ma,X., Yuan,S. and Wang,X.
  TITLE     METTL21A, a Non-Histone Methyltransferase, Is Dispensable for
            Spermatogenesis and Male Fertility in Mice
  JOURNAL   Int J Mol Sci 23 (4), 1942 (2022)
   PUBMED   35216057
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  AUTHORS   Bailey,P.J., Klos,J.M., Andersson,E., Karlen,M., Kallstrom,M.,
            Ponjavic,J., Muhr,J., Lenhard,B., Sandelin,A. and Ericson,J.
  TITLE     A global genomic transcriptional code associated with CNS-expressed
            genes
  JOURNAL   Exp Cell Res 312 (16), 3108-3119 (2006)
   PUBMED   16919269
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166336.15.
            
            On Feb 2, 2019 this sequence version replaced NM_025964.3.
            
            Transcript Variant: This variant (1) represents the longest
            transcript. All three variants encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK033578.1, BC026952.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1492              AC166336.15        59754-61245
            1493-1604           AC166336.15        62309-62420
            1605-3269           AC166336.15        69381-71045
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 32.74 cM"
     gene            1..3269
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="methyltransferase 21A, HSPA lysine"
                     /db_xref="GeneID:67099"
                     /db_xref="MGI:MGI:1914349"
     exon            1..1492
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /inference="alignment:Splign:2.1.0"
     exon            1493..1604
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /inference="alignment:Splign:2.1.0"
     exon            1605..3269
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2352..2357
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="hexamer: ATTACA"
     polyA_site      2371
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="major polyA site"
     regulatory      2632..2637
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="hexamer: AATAAA"
     polyA_site      2655
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="major polyA site"
     regulatory      3245..3250
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
                     /note="hexamer: ATTAAA"
     polyA_site      3269
                     /gene="Mettl21a"
                     /gene_synonym="2310038H17Rik; Fam119a"
ORIGIN      
        1 gggcggtcgc ggctcggcag ggtccggcac gcggagaccc ttgggtggcc aggtccgggg
       61 atggagtttg cagccgaggc tgccggccag gatttagaaa ggcgtccatt tcggccagca
      121 gagtggcggc gtggagcgac gcgagcgccc gagcgcatgt ggtcgggctc aaaacccggc
      181 ctgggcgtcg cacgcccact ccccagccgc gccgtggtta gggatgctcg gtagtgttct
      241 ctcccacttc actgccacca aacgcggtga ctacgtttag ttctctactt cgctacgcat
      301 ccttgggcgc caacgtcgcc gactaactgt ccactttaag gtcggccttt ctcccatgca
      361 aggcacccca cgcccctgtg cactcgccct ccctggcgcc ccaaaaccgt agggcctcac
      421 aggaactaca cagcacgggc caggggaaag cggcggtacc ggggaagggg accggaaacc
      481 cgcgtctctc ttcccggaac cagcttccac cgccttctgc caatccagcc ttttaaggag
      541 gagctccgca cagcgactgg gcaaggctgt gcgcttgcgc ggctcgggta ccctcccgga
      601 accgtgagta tctacgtgga ggcactgcag ggtggccagc gggctgtgtg ggcgccaagc
      661 ctccacccga gggtccgaaa ggagtctctg cagagccctg ctcccaccat gctgggttcc
      721 cgggactctt tcgtgggcgc gagggaagcg catctgtggc ccccgggtgt cgtgcgggac
      781 gtgctttttg tcccgcgggt tgtccgccag tattgtccgc tccagccccc agggtgactc
      841 catccactct gccgtaggga gccttctagg gtcaaaaggc agggcgaacc cttaggattt
      901 agcagaagta cgcatttggc tcctttgtcc tagctgaaca tgaggatgta ggttggcgga
      961 ccaaacaaac aaaaatgtgg gagctgggtc cagacagatc aggtgcccag ggccgtcact
     1021 gtcacttcgt gtaccgttct ttatgtaatg cccaagtagt aacaggagcc tgtagggtgc
     1081 cacagtagtt agagatttct aggcgtttcc tcctcagagt tattagttga caccaattca
     1141 gagccaattt tcacttccct caagtctcgg aggaaaagct gttgaagaaa ttggatgcac
     1201 ctcagtctat ttcttagttt gaacttgtaa taacgtcaac agcttttcca agttacttaa
     1261 gtaagataca gcactcaact tctgactctg gtgacactca ggattctttt tgcatgacag
     1321 gtctcagcag agatagacag aagaaatggc cctggtaccc tatgaggaga gcgcggcaat
     1381 agggctccag aaattccata agcctctcgc caccttctct tttgcgaacc acaccatcca
     1441 gatccgtcag gactggaggc aactgggagt tgctgcagtg gtgtgggatg cggctgtcgt
     1501 cctttccatg tatctggaga tgggtgctgt ggagctcagg ggctgctctg ctgtggagct
     1561 gggtgctggc acagggctgg tgggcatagt ggctgccctg ctgggtgctc aggtgactat
     1621 cacggatcgg aaagtagcat tagagtttct taagtcaaac gttgaagcca acttacctcc
     1681 ccatatccaa cctaaggctg ttgttaagga gctgacttgg ggacaaaatt tggaaagttt
     1741 ttcacctgga gaatttgatc tcatacttgg agctgatgtc atatacttag aagatacctt
     1801 cacagacctt cttcaaacac tgggacatct ctgtagcaac aattctgtga ttcttttagc
     1861 ttgccgaatc cgctatgaac gggatagtaa cttcttaaca atgctggaga ggcaattcac
     1921 tgtgagtaag gttcactacg atcctgagaa ggacgtacac atttacaaag cacagaagag
     1981 aaaccagagg gaggacttgt agcgggcagt attttctaag aattgaatgt accaggtaag
     2041 gtcttacagc tagaactctt agccatgtta atgacgtggc tgactgcaag tcagtccgct
     2101 tagagctgct caaggaacaa agcacatgtg tactttgtag tcggtgcctt gcctcatagc
     2161 tgtaactgtc agccagattg gctcacttct gcaagtggac ttgtgaggtc tggctggtgt
     2221 ttcgttctta tcctgtgtgc tcactgggta agcagtcccc actgatggag actggtgacc
     2281 tggagagtca gtcagacatt ctgggatgga ttttgtctca gtttccttgt ctgctgagtg
     2341 taaacagatt tattacatat attccctgaa atgtgtgtac tgttggagtc tcttgtgttt
     2401 agtctttttt gtgtcggccg tgggctggtc tgaaaccgca ggccaggctg acctcaagct
     2461 tgcagtgact gtcttccctc tgccgccaac tgctgggatt acaggtgtgt gccatgccac
     2521 ctggctgact gtttagttct taagcccctt gagatgaaga tgagttctct gggtctcatg
     2581 tcataccttt ttaccagatt tcaggagcaa gtatataagc aatgaaataa aaataaaatt
     2641 ttacatttga aattacctaa acttgtaggt tagaaattac ttctaaaacc atgcttttgt
     2701 ttgtttcaac tttgctgttt ctcagttttg ctgtatctat ttcttagggt tttttttttt
     2761 ttccttctag tatgtcagtt tttcagagtt caatctcatt tcttcacaaa ggtcagctcc
     2821 catggtgcag tctgtattgt acctataatc acccacttgg tctacagctc ctggtgggct
     2881 gcaagctgcg gggaggcctt gtagctttgc ttacccaggg tccagtaaaa accaagtagt
     2941 caaggagaat ttcagttata ggtaattgat gtttcgtggt gttaaggatc aaaaccaggg
     3001 ttttacagac cctcggcaaa cattagcctt gagttattac gtccccagcc aaaggttact
     3061 agttttttgt tttctctggg tagactttat gaataatgtt atcagtacaa gcttcttctt
     3121 ttacattaaa gcttgactaa aagcttaagc agtttagagc atagctatta taactgcaca
     3181 gtggcagtgg gtgatagaaa tttgttgaat agactattca aagtaagacc tttttttaaa
     3241 aattattaaa tattttggat ataagagta
//
