LOCUS       NM_001024672            1449 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus methyltransferase hypoxia inducible domain containing
            1 (Methig1), mRNA.
ACCESSION   NM_001024672
VERSION     NM_001024672.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK144032.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001024672.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144032.1, AB110950.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 380975, 393082
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1449              AK144032.1         2-1450
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 56.27 cM"
     gene            1..1449
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /note="methyltransferase hypoxia inducible domain
                     containing 1"
                     /db_xref="GeneID:554292"
                     /db_xref="MGI:MGI:3845761"
     exon            1..508
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..805
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /note="UbiE-YGHL1 fusion protein; UbiE2-Hig1-4 fusion
                     protein; Mettl7a2-Higd1c readthrough transcript"
                     /codon_start=1
                     /product="methyltransferase hypoxia inducible domain
                     containing 1"
                     /protein_id="NP_001019843.1"
                     /db_xref="GeneID:554292"
                     /db_xref="MGI:MGI:3845761"
                     /translation="MTLAVQAMRLVVCIVAFPMFLLNLLGMWSWVCKKCFPYFLKRFA
                     MIYNWKMASLKRELFSNLQEFAGPSGKLTLLEVGCGTGANFKFYPPGCRVTCIDPNPN
                     FEKFLFKSVAENRQLQFERFVVAAGEDMHQVTDGSVDVVVCTLVLCSVKNQEKILREV
                     CRVLKPREMSSDEWSAAEDEGQLSRLLRKSRDSPFVPVGMAGFVAVLSYGLYKLNSRR
                     EQKMSLHLIHVRVAAQGCVVGAVTLGVLYSMYKDYIRPRFFNVPKK"
     exon            509..605
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /inference="alignment:Splign:2.1.0"
     exon            606..740
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /inference="alignment:Splign:2.1.0"
     exon            741..1449
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1435..1440
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /note="putative"
     polyA_site      1449
                     /gene="Methig1"
                     /gene_synonym="Mettl7a2-Higd1c; Mettl7a2higd1c;
                     Mettl7a2Higd1c; UbiE-YGHL1"
                     /note="putative"
ORIGIN      
        1 actcgcaaag atgacgcttg ccgtccaggc catgcggctg gtggtctgca tcgtggcgtt
       61 tcccatgttt ctgctgaacc ttctaggcat gtggagctgg gtatgcaaaa agtgctttcc
      121 ctacttcctg aagcggttcg ccatgatata caattggaag atggcgagcc taaagcggga
      181 gctcttcagc aatctgcagg agttcgccgg cccctcgggg aagctaactc tgctggaggt
      241 gggctgcggc accggggcca acttcaagtt ctatcccccc gggtgcaggg tcacttgtat
      301 cgaccccaac cccaactttg agaagttctt gttcaagagc gtcgcagaga accggcagct
      361 gcagttcgag cgcttcgtgg tggcagccgg ggaggacatg caccaggtga ccgatggctc
      421 tgtggacgtg gtggtctgca ccctggtgct gtgctcggtg aagaaccagg agaagattct
      481 gcgcgaggtg tgccgagtgc tgaagccgag agaaatgtct tcagatgagt ggtcagcagc
      541 tgaggatgaa ggccagctgt cccgactcct ccggaaatcg agagactccc cctttgtccc
      601 cgtgggcatg gcaggctttg tggctgtgct gtcctacggt ctttacaagc taaattccag
      661 aagagagcag aagatgtccc ttcatctcat ccacgtgcgg gttgccgccc aaggatgtgt
      721 ggtgggagcc gtgactctag gtgttctcta ctctatgtat aaggactata tcagacctcg
      781 gttcttcaat gtacccaaaa agtaaagcca gaagctggaa gcaaggacgg ccggctcctt
      841 cagtgctagc atcagaaaaa ggaattctca ttgtgttctg aatcatgcta caacgtgtaa
      901 ctcacacaga atcctcatag aatctgtatc tcacgatgct aagcggttgc tctctaaatc
      961 ctctcggtta gctgaaaatt accctgctgc tgtctttttc tgacttaggc cccctggagt
     1021 tccagacttt gtgcacacag gcagcagcgg ttcctgcacc aacaggctct gacagacttc
     1081 taaacaggtt cttagcaaaa atgtggcccc cttccttcac tcagcaagca gtgcagacca
     1141 agtgtgtttt cttagaaaag ggatccagag gaggcaaggt ggctcaggaa tgaagatgct
     1201 tgctgccaag cctggcctca gtgcgcacct tggaacccaa atagtggaag aagagaatga
     1261 agccgaggtt atcctctgag ccccacacgt gtgtgcatcc acacaagcaa gcaaatggct
     1321 gtagaaaggg ggtgggactg gctcttgcag agcaccatgg cagctcacaa cccctgccca
     1381 gagtatgtat acagtgtgca tgcctacatg tgggtaaata ctcacacaca cccaaataaa
     1441 taaatcttc
//
