LOCUS       XM_036156374            2161 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus mesenchyme homeobox 1 (Meox1), transcript
            variant X1, mRNA.
ACCESSION   XM_036156374
VERSION     XM_036156374.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2161
                     /gene="Meox1"
                     /gene_synonym="D330041M02Rik; Mox-1; Mox1; squig"
                     /note="mesenchyme homeobox 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 35
                     ESTs, 9 long SRA reads, 1 Protein, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:17285"
                     /db_xref="MGI:MGI:103220"
     CDS             479..1294
                     /gene="Meox1"
                     /gene_synonym="D330041M02Rik; Mox-1; Mox1; squig"
                     /codon_start=1
                     /product="homeobox protein MOX-1 isoform X1"
                     /protein_id="XP_036012267.1"
                     /db_xref="GeneID:17285"
                     /db_xref="MGI:MGI:103220"
                     /translation="MDPVANSCVRNPQPPAPVWGCLRNPHSEDSSASGLSHYPPTPFS
                     FHQKSDFPATAAYPDFSASCLAATPHSLPRTERIFNEQHPAFPQTPDWHFPISEAGQR
                     LNLGPAGSAREMGAGSPGLVDGTAGLGEDCMVLGTIANETEKKSSRRKKERSGQSLVP
                     EPEDEVETCEGGSACVPTGAGPRGWGLCSFSKFRVRCSKDQNQERLKEPPLQFPPPGP
                     TLSHLWTHPGQPAHTLRCEVAQYVGALNFPEGLAQRPYISAAPSPGLQLPTLS"
ORIGIN      
        1 gaggggactt tgtgtcggtg ggttgacccc tccctctcct ctctcacatt tcactccaaa
       61 aatttgtcac tctctcccca ccgcaggatt taaaagtctg tctcagcatc gggtccagcc
      121 ctctgcaggc actcattcac tcagggtccc cgggaagggc ttgtcagtat gggtgggtcc
      181 aaggtaggac agtcaaaatg ttcagcatgg taggaaacaa ctccgtgccc gatagtcagc
      241 gtgtgtcggg ggcaggaagg cagacgtgaa gcctagacag gtgtggacac gcacatgtgt
      301 gttcctggcc acgtgtttgt ggaatttgag gcaaaatttt tgttttggtt cctggggtaa
      361 agtttccatt caacattttc ctctactgtt taattttttt tttaatttta aattacaaaa
      421 ctctgactag aaaaagcgca atacctttga aaggactggg gcaggcagtg gacagcagat
      481 ggatccagtg gccaacagct gtgtgaggaa cccccagccc ccagcccctg tctggggctg
      541 ccttcgaaac ccccactcag aagatagcag cgcctcaggg ctgtcccatt atcccccaac
      601 cccgttttcc ttccaccaaa aatcagactt cccagcgaca gcagcatacc ccgacttctc
      661 tgcttcctgc ctggcagcca ccccacacag cctgccccgg actgagcgaa tcttcaacga
      721 gcagcatcct gccttcccac agacccctga ctggcacttc cctatctcag aagccgggca
      781 gaggctcaac ctaggcccag ctgggagcgc cagggagatg ggagccggca gccccggcct
      841 ggtggatggc acagcaggat tgggggagga ttgcatggta cttgggacga tcgccaatga
      901 gacggagaag aaatcatcca gaaggaaaaa agagaggtca ggtcaaagtc tggttccaga
      961 accggaggat gaagtggaaa cgtgtgaagg ggggtcagcc tgtgtcccca caggagcagg
     1021 accgagagga tggggactct gcagcttctc caagttcaga gtgagatgct ccaaagacca
     1081 aaaccaagaa agactgaagg aaccccctct ccagttccca ccacccggtc ccaccctctc
     1141 acatctctgg acccacccag ggcagcctgc acacactcta aggtgtgaag ttgcccagta
     1201 tgtgggagcc ttgaatttcc cagaaggctt agctcagcgt ccttacatct cagcagcccc
     1261 ttccccaggc cttcaacttc ccactctctc ttgaactcca aaggactggg aaactataga
     1321 aacagagcct ggggccctct tttctgggtc tcttggctac tacccacacc tagcatcccc
     1381 ctcttacatc agggtctcct ctgggtctgg ccccatctgg cctatgcaga atccattcct
     1441 tggtaccagc tggtgacttg taaaagcaaa cctctctcca gatgttcaca ccgttgagtt
     1501 gaaggttagg aagtggctcc tgtgtctaag gacggagagg atagcacaag agctgatgga
     1561 tgaggactga gatacgtgga ccttggaagt agaacgttct caggctgcag cgtcttgtgt
     1621 tctccaagga ctctgactgc agataaggac aggaaaacaa cccatcttcc tccatgggat
     1681 gcatttggac ctatcctgcg tgttccggaa aaagctttgt gggaagacct cccaggttca
     1741 cacacatgcg cagctcagat ctcagaccca acttctgagg atgctcctgt gaggactggt
     1801 gggaaaacag cctcaggcaa cagtctcctt ggaagagacc cctgtgtgcc tcagtattag
     1861 atggtggatc tcccagatcc tgctgatgtt gcagaaggag ggtcagcaag tatttgaatt
     1921 tcttgcatgg agatctgatt gtgagtgttt aaaaataacc ccagttccct tccccacccc
     1981 atcaagacag aagctgtgga aaatgattgt caaatgagat ggcaagttag agcatgtatc
     2041 agttttcccc tacagcatat ttcatatgtt tttttttcct aagattacat caagctaatt
     2101 gtgcaaggtc aattcacttt gtaagaaaac tctcagagaa ataaatcaac aaaaaaatgc
     2161 a
//
