LOCUS       XM_006498864            2860 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Meis homeobox 2 (Meis2), transcript variant
            X3, mRNA.
ACCESSION   XM_006498864
VERSION     XM_006498864.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006498864.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2860
                     /gene="Meis2"
                     /gene_synonym="A430109D20Rik; Mrg1; Stra10"
                     /note="Meis homeobox 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 11 ESTs, 1353
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 17 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:17536"
                     /db_xref="MGI:MGI:108564"
     CDS             80..1702
                     /gene="Meis2"
                     /gene_synonym="A430109D20Rik; Mrg1; Stra10"
                     /codon_start=1
                     /product="homeobox protein Meis2 isoform X3"
                     /protein_id="XP_006498927.1"
                     /db_xref="GeneID:17536"
                     /db_xref="MGI:MGI:108564"
                     /translation="MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPP
                     LHATQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCT
                     PREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLE
                     LEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSW
                     RDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGASETEADHLLLWKPMTDRTGCVSV
                     QMSREDREESREGKHSPQPLENIIIPCQPPFRGESEAGGDGLDNSVASPGTGDDDDPD
                     KDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFIN
                     ARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGLQSM
                     PGDYVSQGGPMGMGMAQPSYTPPQMTPHPTQLRHGPPMHSYLPSHPHHPAMVMHGGPP
                     THPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ"
ORIGIN      
        1 ttcaacctag ctcactttct tatccggact gggatattaa atatacgaca catccaggag
       61 tttattggag cgcagactga tggcgcaaag gtacgatgag ctgccccatt acggcgggat
      121 ggacggagta ggggttcccg cttccatgta cggagaccct cacgcgccgc ggccgatccc
      181 cccggttcac cacctaaacc acgggccgcc gctccacgcc acgcagcact acggcgcgca
      241 cgccccgcac cccaatgtca tgccagccag catgggatct gctgtcaacg acgccttgaa
      301 aagagacaag gacgcaatct atgggcaccc gttgtttcct ctgttagctc tggtttttga
      361 gaagtgcgag ctggcgacct gcactccccg ggaacccgga gtggccggcg gagacgtctg
      421 ttcctctgac tccttcaacg aggacatcgc ggtcttcgcc aagcaggttc gcgccgaaaa
      481 gcctcttttt tcctcaaacc cagagctgga taatttgatg atacaagcaa ttcaagtact
      541 aaggtttcat cttctggagt tagaaaaggt ccacgaacta tgtgataact tctgccaccg
      601 gtacattagc tgtttgaagg gaaaaatgcc cattgacctc gtgattgatg agagagatgg
      661 aagctccaag tcagatcatg aagaactttc aggctcctcc acaaatctcg ccgaccacaa
      721 cccttcatcc tggcgagacc acgatgacgc aacctcaacg cactccgcag gcaccccagg
      781 accctccagt gggggccatg cttcccagag tggagacaac agcagtgagc aaggcgcttc
      841 ggagactgag gctgaccatt tactattgtg gaagcccatg actgatcgca caggatgcgt
      901 ttcagtgcaa atgtcaagag aagatagaga agaaagcaga gagggaaaac actctccaca
      961 accacttgaa aacatcatca ttccctgtca gccgcccttt cgtggggaaa gcgaagctgg
     1021 aggcgatggg ttagacaaca gcgtagcttc acctggcaca ggtgatgacg acgatccaga
     1081 caaggacaaa aaacgccaga agaaaagagg catattcccc aaagtcgcga caaatatcat
     1141 gagagcgtgg ctcttccagc atctcacaca cccgtaccct tcagaagaac agaagaaaca
     1201 gttagcgcaa gacacgggac tgacaattct gcaagtgaac aactggttta tcaatgccag
     1261 aagaagaata gtgcagccca tgattgacca gtcaaatcga gcaggttttc ttcttgatcc
     1321 ttcagtgagc caaggagcag cgtatagtcc agagggtcag cccatgggga gctttgtgtt
     1381 ggatggtcag caacacatgg ggatccggcc tgcaggtttg cagagcatgc caggggacta
     1441 cgtttctcag ggtggtccaa tgggaatggg tatggcccag ccaagttaca ctcctcccca
     1501 gatgacccca caccctactc agttaagaca tggaccccca atgcattcat atttgccaag
     1561 ccatccccac cacccagcca tggtgatgca cggaggaccc cctacccacc ctggaatgac
     1621 tatgtcagca cagagcccca caatgttaaa ttctgtagat cccaatgttg gcggacaggt
     1681 tatggacatt catgcccaat agtataaggg aactcaagga agaaggaaac acacgcaaaa
     1741 actattttaa gactctctga actttgacca gatgtgacac ttaatatgaa actccagaca
     1801 gctgtgatta ttttttactt tttgtcattt ttcatcaagc aacagaggac caatgggaca
     1861 agaacacaaa tgtgaagcga cgggctcatc gagacaattt tgtccatgca aagatcctct
     1921 ggagaaagac tccgagagtt ataactactg tagcataaac atagggacta agttaaactt
     1981 gtacatttct gttgatcact ccgttatgtt gcctcaaata gttttagaag agaaaaaaaa
     2041 aatatatcct tgttttccac actatgtgtg ttgttcccaa aagaatgact gtcttggttc
     2101 atcagtgaat tcactatcca gaagagactg tggtatattt taaacctgtt gggccaatga
     2161 gaaaagaacc atgctgcgga gcgagatgga cacttgtctg aacctcatca ctaactccag
     2221 cggctagaat gtgttttcat gcccggcctt tgttcccccc gtccatgtgt cctttagttt
     2281 caaacagatc tttatagttt gtgcttcata agccaattct tattatgatt ttgggggact
     2341 gttcttcaaa gagcttgcca gtgaagatct agagacagag cgaaggcttc ttcaagttct
     2401 gagccttggc tgtggacaaa acaatcttaa gttgggcagc tttcctcaac gcacatacac
     2461 acacacacac acacaagtta ttcatggtcg ttgcaccata agtaggattc tatcaggaac
     2521 tcaaagcttg ggggataaaa aggagcaaga gaatactgta acaaacttcg tacagagttc
     2581 ggtcttttaa ttgtttcatg ttagatattc tatgtgttta cctcaattga aaaaaaaaaa
     2641 aagaatgttt ttgctagtat cagatctgct gtggaattgg tattgtatgt ccatggggtc
     2701 ctcttttctc agcacgtgtt cctcactaga agaaaatgct gttaccttta agctttgtca
     2761 aatttacatt aaaatacttg tatgaggact gtgacgttat gttaaaaaaa aaggtgttaa
     2821 gtcacaaaat gcggtaataa atatttcatt tttgattttt
//
