LOCUS       NM_026633                816 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus MAPK regulated corepressor interacting protein 2
            (Mcrip2), transcript variant 1, mRNA.
ACCESSION   NM_026633
VERSION     NM_026633.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Cannavino,J., Shao,M., An,Y.A., Bezprozvannaya,S., Chen,S., Kim,J.,
            Xu,L., McAnally,J.R., Scherer,P.E., Liu,N., Gupta,R.K.,
            Bassel-Duby,R. and Olson,E.N.
  TITLE     Regulation of cold-induced thermogenesis by the RNA binding protein
            FAM195A
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34088848
  REMARK    GeneRIF: Regulation of cold-induced thermogenesis by the RNA
            binding protein FAM195A.
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159277.3.
            
            On Apr 30, 2007 this sequence version replaced NM_026633.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK020614.1, AK003564.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AC159277.3         164630-164743
            115-244             AC159277.3         164825-164954
            245-372             AC159277.3         168647-168774
            373-474             AC159277.3         169016-169117
            475-816             AC159277.3         169329-169670
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 12.96 cM"
     gene            1..816
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /note="MAPK regulated corepressor interacting protein 2"
                     /db_xref="GeneID:68241"
                     /db_xref="MGI:MGI:1915491"
     exon            1..114
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..545
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /note="isoform 1 is encoded by transcript variant 1;
                     protein FAM195A; family with sequence similarity 195,
                     member A"
                     /codon_start=1
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform 1"
                     /protein_id="NP_080909.1"
                     /db_xref="CCDS:CCDS28535.1"
                     /db_xref="GeneID:68241"
                     /db_xref="MGI:MGI:1915491"
                     /translation="MYTITKGPSKLVAQRRTGPTQQQVESRLGELLKCRQPVPPTALP
                     AHLQPSAQTQGPWPLASSGPRLVFNRVNGRRPLTTSPSLEGTQETYTVAHEENVRFVS
                     EAWQQVERQLDGGPADESGPRPVQYVESTPDPRLQNFVPIDLDEWWAQQFLAKITNCS
                     "
     exon            115..244
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /inference="alignment:Splign:2.1.0"
     exon            245..372
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /inference="alignment:Splign:2.1.0"
     exon            373..474
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /inference="alignment:Splign:2.1.0"
     exon            475..816
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      797..802
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /note="hexamer: AATAAA"
     polyA_site      816
                     /gene="Mcrip2"
                     /gene_synonym="9530058B02Rik; Fam195a"
                     /note="major polyA site"
ORIGIN      
        1 aagtgaagct ggtggagggt gcctgatctg gccgctgcca ggggcgggcg ggacggcgca
       61 ccatgtacac tatcaccaag gggcccagca agctggtcgc gcagcgccgc acaggtccca
      121 cacagcagca ggtggagagc aggcttggcg agctcctgaa atgccggcag ccggtgccgc
      181 cgaccgcgct acccgcgcac ctgcagccct cggcacagac tcagggaccc tggccccttg
      241 caagttctgg gccaagactt gtattcaatc gagtaaacgg ccggcgaccc ctcaccacct
      301 ccccatccct cgaggggacc caagagacct acacagtggc ccacgaggag aacgtccgat
      361 ttgtgtccga agcctggcag caggtagagc gacaactgga tggcggccct gccgatgaga
      421 gtggcccacg gcctgtgcag tatgtggaga gcactcctga tccccggcta cagaactttg
      481 tacctattga cctcgatgag tggtgggcac agcagtttct ggctaaaatc accaactgtt
      541 cctagcagct gtccgggaag gaatgttgcc atagtggacc ctttgccaga agaggaccat
      601 ggtgcgccga tccaccttgt ggcctggctg ggtaccggcc acacctgaag tgccaacatt
      661 tggacttttg cacctgttgt tcccttggct tggctgtccc aagctgccag agccaggggc
      721 caaacctgtc taacctcagt cctgctcact gtgcccaggg accagcccct ggggctggca
      781 gggaggagtt caggctaata aagttgagaa actgcc
//
