LOCUS       NM_177597               1584 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus membrane associated ring-CH-type finger 11 (Marchf11),
            transcript variant 1, mRNA.
ACCESSION   NM_177597
VERSION     NM_177597.6
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Yogo,K., Tojima,H., Ohno,J.Y., Ogawa,T., Nakamura,N., Hirose,S.,
            Takeya,T. and Kohsaka,T.
  TITLE     Identification of SAMT family proteins as substrates of MARCH11 in
            mouse spermatids
  JOURNAL   Histochem Cell Biol 137 (1), 53-65 (2012)
   PUBMED   22075566
  REMARK    GeneRIF: results suggest that SAMT1 proteins are physiological
            substrates of MARCH11 and are delivered to lysosomes through the
            TGN-MVB pathway by a ubiquitin-dependent sorting system in mouse
            spermatids
REFERENCE   3  (bases 1 to 1584)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK035990.1, BU961611.1, AK162044.1 and BF467885.2.
            
            On Jul 17, 2015 this sequence version replaced NM_177597.5.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU961611.1, CA465889.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-640               AK035990.1         2-641
            641-1309            BU961611.1         3-671
            1310-1570           AK162044.1         1088-1348
            1571-1584           BF467885.2         25-38               c
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 9.77 cM"
     gene            1..1584
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /note="membrane associated ring-CH-type finger 11"
                     /db_xref="GeneID:211147"
                     /db_xref="MGI:MGI:3608327"
     exon            1..745
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /inference="alignment:Splign:2.1.0"
     CDS             215..1417
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /EC_number="2.3.2.27"
                     /note="isoform 1 is encoded by transcript variant 1; E3
                     ubiquitin-protein ligase MARCH11; MARCH-XI;
                     membrane-associated RING finger protein 11;
                     membrane-associated RING-CH protein XI; RING-type E3
                     ubiquitin transferase MARCH11; membrane-associated ring
                     finger (C3HC4) 11; RING-type E3 ubiquitin transferase
                     MARCHF11; E3 ubiquitin-protein ligase MARCHF11"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase MARCHF11 isoform 1"
                     /protein_id="NP_808265.2"
                     /db_xref="CCDS:CCDS27401.2"
                     /db_xref="GeneID:211147"
                     /db_xref="MGI:MGI:3608327"
                     /translation="MSDEGKKRSSRADSLEAEPPLPPPPPPPPPGESVLVPTSPRYRP
                     PLPAPLERIVGSGEPPVELAPRRKGAGEPLPPLPPSLLPGDQEVTAAGDSCEGPRRLP
                     EVKLPEAATGKGSPGEPEAGACREGERRGTGDQPETRSVCSSRSSSSGGGSDQRSGHQ
                     HQHHQPICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYH
                     VTAIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQRKDI
                     LFQICYGMYGFMDLVCIGLIVHEGAAVYRVFKRWRAVNLHWDVLNYDKATDIEESSRG
                     ESSTSRTLWLPLSALRNRNLVHPTQLTSPRFQCGYVLLHLFNRMRAHEDVSEDNGSGE
                     VVMRVTSV"
     exon            746..901
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1094
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1584
                     /gene="Marchf11"
                     /gene_synonym="9630025C22; March11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagccgagc cggcggctcc gctgaacagc cgcctctgcg gccgccgcgc cggtcctccg
       61 cgtcctctcc tggtcccgcc ttcctagtcc cttcgccccg gttccccttc ccaccctctt
      121 ccctcctccc tctccagcct tcctctgcgc tctctggctg cagtccgcgc ccggcccgcc
      181 accgggcggg caggaggacg gcggcgactc caccatgagc gacgagggca aaaaacggtc
      241 tagccgggcg gacagcctcg aagctgagcc acctctgccc ccgccgcccc cacccccgcc
      301 tccgggagag tcggtcctgg tccccacctc cccacgctac cggccgccgc tgcccgcgcc
      361 tctggagcgc atcgtagggt cgggcgagcc gccggtagaa ctggcccctc ggcgcaaggg
      421 cgcaggagag cctctaccgc cgctgccgcc gtctctgttg cccggcgacc aggaggtgac
      481 agcggcgggc gactcctgcg aaggtcctag gcgccttcca gaggtgaagc tccccgaggc
      541 tgcgacgggg aaaggcagcc cgggggagcc cgaggccggc gcgtgccggg agggcgagcg
      601 gcgaggcacc ggagaccagc ccgaaacacg ctccgtatgt agcagccgca gcagcagtag
      661 tggcggcggt agcgaccagc gctcggggca ccagcaccag caccatcagc ccatttgcaa
      721 gatctgcttc cagggcgcag agcagggtga gttgttaaat ccttgccgat gtgatgggtc
      781 tgttcgatac acacatcagc tgtgtcttct aaagtggatc agtgagagag gctcctggac
      841 ctgcgagctg tgctgttata gataccacgt cacagccatt aaaatgaagc aaccttgcca
      901 gtggcagagc atttctataa cactggttga gaaagttcag atgatcgctg taatcctagg
      961 atccctgttc ttaatagcga gtgtgacttg gctcctctgg tcagccttca gcccctatgc
     1021 agtgtggcag aggaaggaca tcctttttca aatctgctat ggaatgtatg gttttatgga
     1081 tctagtgtgc ataggcctca ttgtgcatga aggagctgcc gtttacagag tgtttaagcg
     1141 atggcgagct gttaatttgc actgggatgt gttaaattat gacaaagcca cagacattga
     1201 agaaagcagc cgaggagagt cttccacaag taggactttg tggctaccat tgtcagctct
     1261 gaggaacagg aacttggtcc acccaacgca actaacctca ccacggtttc agtgtggcta
     1321 tgtgctatta catctattca atcggatgag ggcccatgaa gatgtatcgg aagataacgg
     1381 ctctggggag gtagtgatga gagtgacgtc tgtgtgacag atgtacacag cagcagagtg
     1441 tggaaccctg cacatttcgg aatgtaattg caatgaatgg caaaaccata gcacttctaa
     1501 ctgtacatcc acgaactttt taaaatctat gctttttata tgaacatttg aattgcaaat
     1561 acatttttct gaaaaaaaaa aaaa
//
