LOCUS       NM_178684               4648 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus mitogen-activated protein kinase 1 interacting protein
            1-like (Mapk1ip1l), transcript variant 1, mRNA.
ACCESSION   NM_178684 XM_890224 XM_905896
VERSION     NM_178684.6
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4648)
  AUTHORS   Cobellis,G., Nicolaus,G., Iovino,M., Romito,A., Marra,E.,
            Barbarisi,M., Sardiello,M., Di Giorgio,F.P., Iovino,N., Zollo,M.,
            Ballabio,A. and Cortese,R.
  TITLE     Tagging genes with cassette-exchange sites
  JOURNAL   Nucleic Acids Res 33 (4), e44 (2005)
   PUBMED   15741177
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4648)
  AUTHORS   Powles,N., Babbs,C., Ficker,M., Schimmang,T. and Maconochie,M.
  TITLE     Identification and analysis of genes from the mouse otic vesicle
            and their association with developmental subprocesses through in
            situ hybridization
  JOURNAL   Dev Biol 268 (1), 24-38 (2004)
   PUBMED   15031102
REFERENCE   3  (bases 1 to 4648)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
REFERENCE   4  (bases 1 to 4648)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY783030.1, AK048061.1, AK143495.1 and BG091872.1.
            
            On Feb 6, 2018 this sequence version replaced NM_178684.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK168694.1, AK169333.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 BY783030.1         2-4
            4-2848              AK048061.1         2-2846
            2849-2994           AK143495.1         2734-2879
            2995-3745           AK143495.1         2881-3631
            3746-4646           AK143495.1         3634-4534
            4647-4648           BG091872.1         3-4                 c
FEATURES             Location/Qualifiers
     source          1..4648
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 24.6 cM"
     gene            1..4648
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /note="mitogen-activated protein kinase 1 interacting
                     protein 1-like"
                     /db_xref="GeneID:218975"
                     /db_xref="MGI:MGI:2444022"
     exon            1..132
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            133..154
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..865
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     MAPK-interacting and spindle-stabilizing protein-like"
                     /codon_start=1
                     /product="MAPK-interacting and spindle-stabilizing
                     protein-like isoform 1"
                     /protein_id="NP_848799.1"
                     /db_xref="CCDS:CCDS49469.1"
                     /db_xref="GeneID:218975"
                     /db_xref="MGI:MGI:2444022"
                     /translation="MSDEFSLADALPEQSSAKPPAVTNTKAGHSSQGWPGSSPWSNPS
                     APPAMPSGLPPSSAAPSTVPFGPVPTGMYPSMPPTGPPPGPPGPFPPPGPSCPPPGVP
                     YPAPAVPGPGPTGPYATPNMPMPELPRPYGAPTDPAAAGSLGPWGPMSSGPWAPGIAG
                     QHPNMPYRSPGPYPTVPPPVSGAPPVPWGTVPPGAWGPAAPYPGPAGSYPTPAPHPAL
                     NNPYQVPSGPAGAPPMPGGPHSYH"
     exon            155..853
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            854..4648
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4515..4520
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      4534
                     /gene="Mapk1ip1l"
                     /gene_synonym="9130202B12; C130032J12Rik"
                     /note="major polyA site"
ORIGIN      
        1 ttccttttcc ggtgccagga ggagccgtgt cgctgtcgtc tcggtccatc aggccttcag
       61 cgggtctcca ttgcccgtct ctctggactc accgccgcca ctgtgccgcg cctaggactc
      121 ggatcctgcc gggaaaatgt cagatgaatt ttcgttggca gatgcgctac ctgaacagtc
      181 ctctgccaaa ccgcctgctg tgaccaatac aaaagctggc cattcttctc aagggtggcc
      241 aggctccagc ccgtggagta acccaagtgc tccacctgca atgccatctg gactcccccc
      301 gagtagcgca gcaccctcta ctgtgccttt tggaccagta ccaacaggaa tgtatccctc
      361 catgcctcca accggaccac ccccaggacc cccgggaccc tttcctcctc ctggaccatc
      421 atgcccccca cctggtgttc cttatccagc ccctgctgtg ccaggccctg gccccacagg
      481 gccatatgct acgccaaata tgcctatgcc agagctgcct aggccgtatg gtgcgcccac
      541 agatccagct gcagccggtt ctttaggtcc atggggaccc atgtcttctg gaccttgggc
      601 accaggaatt gcggggcagc atcctaacat gccatatcga tctccagggc catatcccac
      661 tgttcctcct ccagtgtcag gagcaccgcc tgttccgtgg ggcactgtgc caccaggagc
      721 ctggggacca gcagcaccat atcccggccc tgcaggatca taccccacgc cagcacccca
      781 tcctgctctg aacaaccctt accaagtgcc ttcaggacct gctggtgctc cacccatgcc
      841 tggtggcccc cactcttacc attaagttga cagtggatga agagatggcg caatgctttt
      901 tgaagtacat gtgtatgcac gagaaagcat atataatggc tggtttcgct gttggttgag
      961 ggcatttgtg aaagaacttt gcacctcagt tcctgcttca tgtgtttgaa tatgtagaac
     1021 atcacgtggg tacaatcaga taaatgtaga agcgaatcat tcaagtgtgc ttaatgtgat
     1081 tatgtgtatt gaataacatt tgataatatt tgtttaaagc atagctatgc cctcaaaatc
     1141 taaataacat ggattattgt tagaatctac atcttaattg acaacatcaa gtacttttta
     1201 taatcacacc accaccacta ccaccgcacc ccacagaacc aagaacaatc acttaattga
     1261 aacatgactc ctcaacattt tgagctcctc ctacctacac aaacctggcc ctcttactat
     1321 atttatctat ttaactctgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     1381 gtgtgtgtgt gtgtgtgtgt gtacgcgcgc gctaagttta attcaaccat tatatccagt
     1441 tctctcctat caagattgct tcatgatcta aggacagatt cttgctctga cggagctcta
     1501 gaggaatgct ggcactacat gcacctggag ttttaagttt tcctgtggta gtcagactgc
     1561 ccatgctgag tccaacggga ggaaacaagg aaaatgagcg aaatgcgtaa ggcagcgctg
     1621 ttgaactgtc acccagccat ctgagtagca aggccagcac accgatgtca catgctatgc
     1681 cttcttaaca atctaagttt ggaatttaca aatcattgtc tccttaagaa aacaattaca
     1741 aaaggtggtt catttctatc attacattat ttctttgtaa gttagacagg tactgggcct
     1801 tttatgagaa gatgctcaga accccagcag ggcttttggc tgtgccctgg aggcgtgggc
     1861 tttggcattt tggtgtagtc tgcttcttgc atcttccctt ctcaccccgc cagtctgggc
     1921 ctgggggttt ccagcttccg gtcagatcta gagtcttcac cctcacagca aagcgttact
     1981 cttgagcttg tttgggaatg cagagctatg ggggcagtaa ctggtgaccc aaaaatattg
     2041 ctggccttcc caccacgtgg gttaaaacag acttataaag acaccttcct aattaagcag
     2101 ggaacttggc tcgagtgcat tcgatgccag cttttttttt ctggagctct cagcaagaaa
     2161 cctgtcctcg gagctcagtg ccattttgag agaaacattt tgttattttg gcagaactag
     2221 gtataatggt taaattaaac ttagtaatac aagtatgtca ctaaaagata aaaagaggcc
     2281 ccagccttag gtagaggaac tccttttacg cccgaggatt tgtcctctag agtatgtttg
     2341 aggttcttcc attggtttct ctattggatg ccatcctatt aggctttgct gaagtaacaa
     2401 cttcttttgg actccacaaa gattgctggt tctcccctgg gagcttcttg gatatggagc
     2461 ctgacctgcc agcctgagta ttggagccct ggaacatatt gtcactgccc tgcctaccta
     2521 cataactcta agccaataat tatcagttgc caagttcatc agccagtgtg gggttttgtt
     2581 gttctttgta gggtcattgg tgttcttgtt agtggaactt aacagcccac cctgtgtggt
     2641 gtgctctcaa tggtacttcc attaaaccct ggttttttag gactttacaa ctgaataatt
     2701 gggagttact gggtttatca ttatttaata taagagtgga aatcaaaggg atagcaggtt
     2761 ttcttgtttt tttatttgtt ttcagaatat gtctcttgtt gccttaaggg tagggtgttt
     2821 ctgggttcag gaaagaatca agaaaagcaa aaataaaata aataaccagt agccaaatga
     2881 ggaaaattat ctggaaagga ttttctgttt tgttttaacc caagaataat cctgctttca
     2941 gaacaaacag tgtaggccat gactggtcta ctgaaaagac agattgtcag taagtgtttg
     3001 gtcttaaagg agtcaattat agaatttgtt gacatgtcct cacaataatt cttaaataag
     3061 tacaataaag atagttgaga tgtgtacaag gatagttttt gtgaagttga agtctttggt
     3121 tttgtaatgt tccgttcttt acaaagcctc cctcccgacc ttgttggttt tgctgtcagt
     3181 ggtggttaac agtctgtttc tcatgacaca cttcacgggt ggcctcccct agacagcttt
     3241 tggaaactgt ggattagaga tagccccact ctgtttctgg taagatactg cctcagtatc
     3301 agtggttgcc tacacttatc aactggtgcc acgtattcct caaaatgcca agattataaa
     3361 ctgcaagttt cacgggcctt tgaatccttc cagcgtttag tgaagcgggc gcctaactga
     3421 accagctgct ggagaacagt ggatgctctg gggggaaact gatggaactt tcagaattct
     3481 gccaatggaa actacagtgg acgatggcaa ttgggactga gatttcctgc ttgcttctat
     3541 ctgcagagcc catctgagga ctgacgctgt ccgtgtgcac atccgggatg gagctctggt
     3601 ccctgtgctt aaggagcttc ccggtggggc cacaggtgca gccaccagag gaaggggatt
     3661 agtgatagct ctcagagagg agagcaggct gtcctgggca ttttaaaaaa tggcattttg
     3721 gtttggtttt tttttttttt tttttgaggt ggggtctcgc cacataactc tggctaacct
     3781 gaagctcttt atatagttga agaactcaca aaaaactttc tgtttctgtc tctgtctccc
     3841 aaattctgag attaaaggca tgtggctggc ttaataaact ggttgtgtgt gtgtatatat
     3901 gtaaatgaat atctttcatg agccacatgt ggtgttgcat gccgttgata tcccagcact
     3961 tgggaggcag aggcagtcag atctcttaag ctcaaggaca gcttggtcta cagagaatta
     4021 cagggcaacc agggttatac atggaaatga agtctcacaa aaccatcatt ccaagattgt
     4081 agtgtttatc agtgcaacta ttcaagtgta cagtgtagca ggattgtttc cgtttgtctg
     4141 ggtaaaggcc cagctgccac tggttgacac tgacctcatg aagtggacac tactttttat
     4201 atgttctctg taagaggttt tgtaatactt ttttgagatt atgatttttt tcacttattg
     4261 aataatgtca aatttgatgt gttttacagt ctatgcattt taagttaagc tgcctgaagt
     4321 gtggtttgag acatgtatgt ttatactgta agcaatggaa gataataggt tttgtcacct
     4381 gctgctgtat ttggaaacaa agacaaatgt tgcctgaaga agtaattata attaggagta
     4441 ggctattgat gtgatcattg atatttttga ggtaaacttg tttgcttttg tgtgtaatac
     4501 ctgaaagctt ttttaagaaa atgtattttc gtgatttcat ggtttctttg tgtattttat
     4561 tacctgggcc cgattctagg cttccctaaa caagttcaga gccctctcag ttccctgttt
     4621 gtagtaataa agaaaacaag ggttgcaa
//
