LOCUS       NM_177293               2795 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus MAP7 domain containing 3 (Map7d3), mRNA.
ACCESSION   NM_177293
VERSION     NM_177293.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Lu,C., Zhang,Y., Qin,Y., Xu,Q., Zhou,R., Cui,Y., Zhu,Y., Zhang,X.,
            Zhang,J., Wei,X., Wang,M., Hang,B., Mao,J.H., Snijders,A.M.,
            Liu,M., Hu,Z., Shen,H., Zhou,Z., Guo,X., Wu,X., Wang,X. and Xia,Y.
  TITLE     Human X chromosome exome sequencing identifies BCORL1 as
            contributor to spermatogenesis
  JOURNAL   J Med Genet 58 (1), 56-65 (2021)
   PUBMED   32376790
  REMARK    GeneRIF: Human X chromosome exome sequencing identifies BCORL1 as
            contributor to spermatogenesis.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB610806.1, AK030211.1, BC096764.1 and AK048385.1.
            
            On Apr 11, 2007 this sequence version replaced NM_177293.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC096764.1, SRR7345562.3298987.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-83                BB610806.1         2-84
            84-671              AK030211.1         1-588
            672-2189            BC096764.1         674-2191
            2190-2783           AK030211.1         2107-2700
            2784-2795           AK048385.1         1794-1805
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 30.16 cM"
     gene            1..2795
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /note="MAP7 domain containing 3"
                     /db_xref="GeneID:320923"
                     /db_xref="MGI:MGI:2445051"
     exon            1..89
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..2653
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /codon_start=1
                     /product="MAP7 domain-containing protein 3"
                     /protein_id="NP_796267.2"
                     /db_xref="CCDS:CCDS40982.1"
                     /db_xref="GeneID:320923"
                     /db_xref="MGI:MGI:2445051"
                     /translation="MADPTFAATSSSTSFRGLHERLVAMTQELAEERRHKRGINSSAG
                     ANKRSSSTPDGSVLKNDVKQQLAKERREQQKRQQEANKEKQLLEKEQKAKLQYEKQLE
                     EKHRKLKEQKEKDQRRQASAEEKRKQKQAEDTEKFKAVVSRTLERCNRIDQRQKRWSW
                     EGGVMNADKSGKLENKRSSSLSRKDNRLHPRGDMQHVDNTPGMTKYVFRYVTAPVFSS
                     DEIKSSAMFCKPSAKTPVAAKLEKITTKKLDASLRGHVEGLSMMNIEIPPKITIEVPS
                     PPKLEESSEADAEVRLQTMDDISKVKEDASQKVDIKVPTDENIARHPKPNVEELSPVS
                     VDTSSSVELSSIVSVNSSPSLSTGSFSFGSVEISPVVSIDASLETNIDTSPELSMDSG
                     NTKVASEIKTEAPLQARGESRLEASVEGQPEANVEGSPKNPEIDKRNINLTTKKQPLC
                     HIPCYRWPSSSALGCRPPSPLKALQTRKIRPPSPIPVSSKLSTKTSLSYKITPVQNVL
                     YVPNSLGVIATKKETIQKYPIKKEFGNRSMPSAEAIKKAFIQIRHAAYEQSKNEKERL
                     QKEETKQRIARKPEIMAEKLDKVPAEGSLPCQDEQQDKNPTKTFLESPEVQKAELQKG
                     DSAMMKSRDSAEQRKKEQENILQHWQERLERRKASEISFSSEDEADDEGESEDSLEIF
                     PSGGKMLSMKLKKFHKYAKTKPQKLVFLQSGTDEVDTNKNVYFNGDMKAVKQKDPKYS
                     MIQGKGSKLSAKKPPTRPIRSRKTKEGSTAIRPTQSASSNPNHKWVCDKVIDFNQTPF
                     LKTTLTKSNKESPADSKIACQGPQAHLDHRKRTKSVSVPLTNVLSHLHITGRASNLEH
                     PFASVYSRLAFGKEAEESDV"
     exon            90..182
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            183..260
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            261..424
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            425..533
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            534..626
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            627..1315
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1316..1443
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1444..1616
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1617..1743
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1744..1888
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1889..1993
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            1994..2075
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            2076..2265
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            2266..2645
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     exon            2646..2795
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2752..2757
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /note="hexamer: AATAAA"
     polyA_site      2782
                     /gene="Map7d3"
                     /gene_synonym="4933424A10Rik; Mtap7d3"
                     /note="major polyA site"
ORIGIN      
        1 ggttctcaac tactctctga agatggcgga ccccactttt gctgctacca gtagcagcac
       61 atctttccgg gggctacacg aacgcttggt tgccatgact caagaactag ctgaagaaag
      121 gcgacataaa cgtggtatta attcttctgc aggtgcaaac aagagatcgt caagtacacc
      181 agatggttct gtccttaaaa atgatgtcaa acagcagcta gccaaagaac gcagagaaca
      241 acagaaacgt cagcaagaag ccaacaagga aaaacaactg cttgagaaag aacagaaggc
      301 gaagctgcag tatgaaaagc aattggaaga aaaacaccgt aaactgaagg aacaaaaaga
      361 aaaggaccag cgacgacaag catctgcaga agaaaaaaga aaacagaagc aggcagaaga
      421 tacagaaaaa tttaaggctg ttgtgtctcg tacattggag cgatgcaatc gtattgatca
      481 acgacagaaa aggtggtcgt gggagggtgg tgtgatgaat gctgacaagt ctggaaaact
      541 ggaaaataaa cgaagttcct ctctgagtag aaaagacaac cggttacatc ccagaggtga
      601 tatgcaacac gtggacaaca cacctggcat gaccaaatat gttttccgat atgttactgc
      661 accagtgttt tctagtgatg agataaagtc ttctgctatg ttctgtaaac catcagcaaa
      721 aacgccagtt gcagcaaaat tagaaaaaat aactacaaag aaactagacg cttctctcag
      781 ggggcatgtg gaaggactct caatgatgaa tatagaaatc ccacccaaaa taacaattga
      841 agtcccctct ccaccaaagc tggaagaatc atctgaggct gatgcagaag taagactcca
      901 aaccatggac gacatctcta aagttaaaga ggacgcctcc cagaaggtgg atatcaaagt
      961 acctactgat gagaacatag caagacaccc aaaaccaaat gttgaagaac tctccccagt
     1021 gagtgtggat acctcttcaa gtgttgaact atcctccata gtgagtgtca actcatcccc
     1081 ctcgctgagt acaggatcat tctcctttgg gagtgtagaa atatctcctg ttgtcagcat
     1141 agatgcctca cttgaaacaa acatagatac ctcacctgaa ttaagtatgg actcagggaa
     1201 tacgaaagtg gcctcagaaa ttaaaacaga agcacctctt caggccaggg gggagtcacg
     1261 ccttgaagca agtgtggaag gacaacctga ggcaaatgtt gaaggatcac caaagaaccc
     1321 agaaatagac aaaagaaaca taaaccttac caccaagaaa caaccgctgt gccacatacc
     1381 atgttacaga tggccatcat cttctgccct tgggtgtcgc ccaccttctc ccttaaaggc
     1441 tctgcagact cgaaagatac gacctccatc tcctatacca gtctcatcaa aattatcaac
     1501 aaagacttct ttgtcatata aaataacccc agttcagaat gtcctatatg tgccaaattc
     1561 attaggtgta atagcaacca aaaaggaaac catccaaaag tatccaatca aaaaagaatt
     1621 tggtaataga agtatgccaa gtgctgaagc aatcaagaaa gcttttatac agatacgcca
     1681 tgctgcttat gagcaaagca aaaacgagaa agaaagactc cagaaagaag agacaaagca
     1741 aagaattgct cggaaaccag aaattatggc agagaaactg gataaagtcc cagcagaagg
     1801 ttccttgcca tgccaagatg agcagcaaga caaaaatcca acaaagacat ttcttgagtc
     1861 accagaagtt cagaaggcag agttacagaa aggggacagt gccatgatga aatctcggga
     1921 cagtgctgaa cagagaaaga aagaacagga aaacatcctc caacattggc aagaaagatt
     1981 agaaaggaga aaggcttcag aaatatcttt ttcatccgaa gatgaagctg atgatgaagg
     2041 tgaaagtgaa gactctcttg agatatttcc atcaggagga aaaatgttat ctatgaaact
     2101 caaaaagttt cacaaatatg ccaagacgaa gcctcaaaag ctcgtgtttt tgcagtcggg
     2161 aactgatgag gttgatacca acaaaaatgt atattttaat ggggacatga aagctgtcaa
     2221 acaaaaagac cccaaatatt ctatgattca aggaaaaggc tcaaagttat cagctaaaaa
     2281 accacctacc cgcccaataa gaagcagaaa aacaaaggaa ggcagcactg ccatccgtcc
     2341 tactcaaagt gccagcagca atcccaatca caagtgggtt tgtgacaagg ttatagactt
     2401 taatcagaca ccttttctaa agaccactct aacaaagagc aacaaagaaa gtccagcgga
     2461 ttctaaaata gcttgccaag gtcctcaggc acatttggac cataggaaaa gaaccaagtc
     2521 tgtttctgtc cctttgacca atgttttgtc ccacctccac ataactggaa gagcatctaa
     2581 tcttgaacat ccctttgctt ctgtctattc cagactggca tttggaaaag aggcagaaga
     2641 gagtgatgtg taaatcctgt ggggccttga agattgatca tctttcactc tgtattaaaa
     2701 ctcccaaggc caagactcaa aattgtctcc ttttagactt gaacctggca aaataaatac
     2761 gtgtccaaaa agaaatggaa aacaaaccaa aaatt
//
