LOCUS       NM_198599               3290 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus MAP6 domain containing 1 (Map6d1), mRNA.
ACCESSION   NM_198599 XM_148678
VERSION     NM_198599.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Gory-Faure,S., Windscheid,V., Bosc,C., Peris,L., Proietto,D.,
            Franck,R., Denarier,E., Job,D. and Andrieux,A.
  TITLE     STOP-like protein 21 is a novel member of the STOP family,
            revealing a Golgi localization of STOP proteins
  JOURNAL   J Biol Chem 281 (38), 28387-28396 (2006)
   PUBMED   16837464
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB653005.1, BC116220.1, BE979311.1, AK163656.1 and BE948536.1.
            
            On Apr 4, 2007 this sequence version replaced NM_198599.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK163656.1, SRR1660817.29384.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                BB653005.1         2-39
            39-626              BC116220.1         2-589
            627-851             BE979311.1         301-525
            852-3271            AK163656.1         816-3235
            3272-3290           BE948536.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 12.39 cM"
     gene            1..3290
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /note="MAP6 domain containing 1"
                     /db_xref="GeneID:208158"
                     /db_xref="MGI:MGI:3607784"
     exon            1..425
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            426..543
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            544..3274
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3247..3252
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3274
                     /gene="Map6d1"
                     /gene_synonym="A330066I15Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtggggtag tgcgcgcgcg cggcgcaggc gcgcggccga gcggcatggc gtggccctgc
       61 atcagccggc tgtgctgcct ggcccggcga tggaaccagc tggaccgctc ggacgtagcg
      121 gtgccgctga ctctgcatgg ttactcggac cccgggagcg aggagtcggg cgcagactgc
      181 agcgtctcgc gcgggaaccc gtcggtcgca ggcgcgcggg agtccagccg cgctgtgccg
      241 ctcacccagt accagcgcga tttcggtgtg cgaaccgcgc gcgccgggtc ccgggatgcg
      301 gctcaagagc gcccatcggg gccgggcggc cgcagaggcc agtcctcggc gccccccacc
      361 cggacggtct acgtgctgcc ggtcggggac gcggacgcag ctgtagtagc gaccacgtct
      421 tatagacagg aattccaagc ttggactgga gtgaagccct caagatccac aaaggcaaga
      481 acagccagag tcgtcacaac tcacagctcc ggatgggacc ccagccctgg ggccagcttc
      541 caggttccag aggtgaggaa attcacacct aatccctcag ccatctttca gacatcagct
      601 cctcagactc tcaatgtgtg accagtggaa gccatggttg ggaaagccga gcacagccag
      661 acctaccagg cggagtcctg gcctgctcct ttgcttacag cagcatggct gctggctctg
      721 ggcatggcgt ggtgtggagg caaagggaca ggacaccacc agctgcactc aagcctcccc
      781 atctgtcctc cagcggtggc agggagggag actttcttgt cttctaaatt gccatctgac
      841 atccttcact tcttaaatct gacgatcaat tcagctgtga cctgaacagc tccagactaa
      901 gaaatgtgca cactatcaag tccttggtag gtcagtttca cactttggat ggtttcccca
      961 agatgcatgt tattatttat ttatttttga tgatgtatga tagtatccag gctgtatcct
     1021 catctctttg cagtgaccca cgtgcttacc attaagaaat ttagctcagc agtggtggca
     1081 catgccttta atcccaatgg agggagacaa aggctgatct ctgtgagtct gagaccagcc
     1141 tggtctacag agcgagtgat aagacagcca gagctacaca gagaaaccct gccgcaaagc
     1201 aaatggggag agggtatcaa tcttaggtta ccaggagtaa tcccagcact ctagaggcag
     1261 aaggatctct gaactcattg ccttcctggt ctacatagca agttcctgga gagccagggc
     1321 tacacaccca atttcaaaac aacaaaaatc tttagggagt ttgtgtgtgt gttttaatat
     1381 ataattactc gcacacaact ctcatggtag tgatgtgtgt ctagggagat catccatgtc
     1441 aatctcaacc atgtaatttc tttatagcta agatcctgtt tcaaaggaaa caattcctag
     1501 gatgagtgga accttgaaag cacgaatggc attcacccca ttttactaat ttcagttgtc
     1561 ccccctcaac acgaggatag aagggagctg gaagcatgtc tggagagcat ctcctatagg
     1621 gctttaggct ccccaactct ggttagctac ttactaccct gctgagggga taactcatcc
     1681 tgtctttgga aaactgaggg gataactcat cctgtctttg gaaaactcat ctccataaat
     1741 tccagccagc acgtctgtgt ggaacaagcc cattcccctt tgcacacccc ttcaagcgct
     1801 ggaaagagcc tgagaggttt agcagtgtct ggtaagaact ataaggactt ccttgtggtt
     1861 cttttcttcc caggctctcc ccacgggagc atctaggtct gatggtgttt caaagccatg
     1921 gctgaggaag cagctcagac ctcccacaca gcatcccctc agaggtgcta gcaggcccag
     1981 cctccctctt accaaccata tgcatacgcc aaggatcctg tccctctagg tctgtcagct
     2041 tgcatgctca gtgttcctaa gagggaaacg attgcctgct gggcagatta acaatttact
     2101 aaaatgcaaa aatgtgctgc agcaacttgt tataaacaca ggcatattct ttcccatccc
     2161 tgtagcctcc caaaaatggc cgtaatatag tgtagcttcg ctaatatcct tgaactccaa
     2221 acccttcttg ctcagagctg cagatgcttc cagtgttgca ggtgttacct tctttccact
     2281 tcagctctcc tgcatactta agtgggaaaa ggggccatct gtgccactgc tgcttcctca
     2341 ctggcaggga cagtgagcac tccacttctg cacctgaaag tgagactgct attacctata
     2401 ccctgctggc ttgttaggac atcctccgga aagccagcca agcatggctc cccaatagtc
     2461 ctttccactt taactcttcc aggtaccttt tggtcctgct gtagccactg gcatgcccca
     2521 gctaaaagcc tccagctgta cactgctagt gaccgcacca catgtccagc aaccccaccc
     2581 cctgcattca ctcttggtgt agagatgcat gacctcagca gtgtgccaca aagctcttct
     2641 caccagtcct cctgaggaat gaaaccctgc ccttaggaag tccctcctca ttgcagatct
     2701 gagtatggtc acatggttcc acgaacaacc aagaagccac caaggccaat gtcagccttg
     2761 ttctcttagt tctgagtcca ccttacacac aatgtgcaca aagaccagaa aaatacactg
     2821 gaggatgagc agggctcatc tctgagaaag gagtgtgtat atggcgttat atgtacgtgt
     2881 gtattcctgt atatatgggg atgtgtgttc atgtatgtgc aggcacgtgt agaggacaga
     2941 ggacaactca gagtattctt caggtaccct tcatttttct cactggccca gggctcgcca
     3001 agtagcttag gctgcttgta tagcaagcct caagtgatct gcccatctct gctgcctctc
     3061 cagtgctcag attttaagtg tgcaccacca tgcctgccat ttttatgtgg gttctggtga
     3121 ctgaactcag gtactgcatg cacttcaact gagccatctc tccagcccaa atttttaaaa
     3181 atactttatc atacctgcta aaattcctat aaatttaata acttttatat tctgtaagtt
     3241 ttgaaaaata aagcacttta atctgttaat ttgaaaaaaa aaaaaaaaaa
//
