LOCUS       XM_036154660            7279 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus microtubule-associated protein 4 (Map4),
            transcript variant X18, mRNA.
ACCESSION   XM_036154660
VERSION     XM_036154660.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Mar 6, 2024 this sequence was replaced by
            NM_001428296.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7279
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..7279
                     /gene="Map4"
                     /gene_synonym="MAP-4; Mtap-4; Mtap4"
                     /note="microtubule-associated protein 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 74 ESTs, 3346 long SRA reads, 4 Proteins, and
                     89% coverage of the annotated genomic feature by RNAseq
                     alignments, including 41 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:17758"
                     /db_xref="MGI:MGI:97178"
     CDS             2120..5071
                     /gene="Map4"
                     /gene_synonym="MAP-4; Mtap-4; Mtap4"
                     /codon_start=1
                     /product="microtubule-associated protein 4 isoform X18"
                     /protein_id="XP_036010553.1"
                     /db_xref="GeneID:17758"
                     /db_xref="MGI:MGI:97178"
                     /translation="MADLSLVDALTEPPPEIEGEIKRDFMAALEAEPYDDIVGETVEK
                     TEFIPLLDGDEKTGNSESKKKPCLDTSQVEGIPSSKPTLLANGDHGMEGNNTAGSPTD
                     FLEERVDYPDYQSSQNWPEDASFCFQPQQVLDTDQAEPFNEHRDDGLADLLFVSSGPT
                     NASAFTERDNPSEDSYGMLPCDSFASTAVVSQEWSVGAPNSPCSESCVSPEVTIETLQ
                     PATELSKAAEVESVKEQLPAKALETMAEQTTDVVHSPSTDTTPGPDTEAALAKDIEEI
                     TKPDVILANVTQPSTESDMFLAQDMELLTGTEAAHANNIILPTEPDESSTKDVAPPME
                     EEIVPGNDTTSPKETETTLPIKMDLAPPEDVLLTKETELAPAKGMVSLSEIEEALAKN
                     DESSAEIPVAQETVVSETEVVLATEVVLPSDPITTLTKDVTLPLEAERPLVTDMTPSL
                     ETEMTLGKETAPPTETNLGMAKDMSPLPESEVTLGKDVVILPETKVAEFNNVTPLSEE
                     EVTSVKDMSPSAETEAPLAKNADLHSGTELIVDNSMAPASDLALPLETKVATVPIKDK
                     GTVQTEEKPREDSQLASMQHKGQSTVPPCTASPEPVKAAEQMSTLPIDAPSPLENLEQ
                     KETPGSQPSEPCSGVSRQEEAKAAVGVTGNDITTPPNKEPPPSPEKKAKPITEAKVAE
                     KRTSPSKPSSAPALKPGPKTTPTVSKATSPSTLVSTGPSSRSPATTLPKRPTSIKTEG
                     KPADVKRMTAKSASADLSRSKTTSASSVKRNTTPTGAAPPAGMTSTRVKPMSAPSRSS
                     GALSVDKKPTSTKPSSSAPRVSRLATTVSAPDLKSVRSKVGSTENIKHQPGGGRVQIQ
                     NKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGG
                     AVKVTEGGGSEALPCPGPPAGEEPVIPEAAPDAGAPTSASGLSGHTTLSGGGDQREPQ
                     TLDSQIQETSI"
ORIGIN      
        1 gaaccaatta gttttattgg ggctaccttc agtactatga tgaaatatga gtgaggggtt
       61 actgacagta gcagaaatga ctcaaagaca gctgaatcac caaggcccac cccaatactg
      121 gtaacaactc acaaattggg aaaactgggg cacactgcat agcctgcagg ccactcaatg
      181 ggttgagtaa gtaaggctgg tctaaacctc ttccaggcgg cttggctggt ctctgcttct
      241 ctcaggcagc tggtctggtc ttaagagtct gcaacttttg ctcttctgag aatcttcttt
      301 actgcgtagg tcttcttttc tgagagggac gctgaactct ggcaggaagt agcctagtaa
      361 aactagatgg tttcagggcc ttcctgctta atggaaagtt ccaatcttgg aggaaactgt
      421 tacacaatat cgatacagaa aggtttagaa gtcttccaca ggtttacata atttgtttag
      481 ccatgctgag acttcatcgg gaatatggta ttttaccttt ggcatcctat tagtaacttt
      541 attgagagtg actattatct aattttcata aacgaggaaa ctgaggctta cctttcctaa
      601 ggctacaaaa gcacagctgt acttcctaac caagttctcc tggtaacccc tatatgcctg
      661 agtttacaat cctagcacct ggctactgaa gttaaagccc cactagccaa acattgtctt
      721 gttgacactg tggtgttact aaacttgcct gttaacataa tgagaatgag gagtgctgga
      781 gagaaaatta aactattaaa gataaggctc ataactaaaa ctacaaaggg cactgaggat
      841 atattaacca tgtagggctc ttgtgatgat taagatatgt ggatcatgga ataagcataa
      901 aggagttggg tatcactatt tcttctggac cagtactatg cacaggcaat ataatgtgac
      961 cgtagtgaca ctctagagga ggggggcggg gagaggagag taggaggagg taattttagc
     1021 tgtgtatggc ggctcaaatt tgtaatctca acactcagga ggctgaggct gagggattgc
     1081 catcactctg agggaggtgg gtgatgcaaa gtgaatttca ggccagcctg cgctatggtg
     1141 ggaggcactg tgcaaaaaac ccaaaacaga acaaaggtga tctttaagtt ttcaagtaac
     1201 tacgttgaaa aaagaaaaaa actaaaagaa acatgaaatt atttaagtta ctaaatacac
     1261 tcccaattat ataatcagtt ttttcttgtt tgtttgtttg tttttcgaga cagggtttct
     1321 ctgtagagcc ctggctgtcc tggaccttac tttgtagacc aggctggcct cgaactcaga
     1381 aatccgcctg cctctgcctc ccgagtgctg ggattaaagg cgtgcgccac cacgcccggc
     1441 cccatataat cagttttgca ttcaacaatg ttccttctca acttggtcca gccacgtttc
     1501 aggcagctac tatgagctgc gccctcagct cccagtcagt tcctcgcggt tagcagtgaa
     1561 cccaaggccc cgcccccgcc cctcccagat tacatcatag agcccaccag tcagggccgg
     1621 cggggcccac tcaggcccac ccgtacgcag gcgcgtgcgc ctgacactag catcctttct
     1681 gctggaaaag gaagcggcgg ccctctcaga acggcggagg cggcctgagc ctcgccattc
     1741 gctgaggcat ccgcgggcgg gaggccgcag tctagacccc cgacgcgcgc cgcgccaacg
     1801 gtccgccact cgtgctgctt ccacggagag ggcgaggagt aggggccggc gtggattggt
     1861 tcgcggcgcc tcggcccgcc cttcggtggc gcccattggc tggggcggca cccgctgacg
     1921 gcgagcacgc tccgccttcg tgccggcctt caagagggcg acgaggaagc ggccacctcc
     1981 ctgtgccccg cccctccggc taggtctgtg gcttctgcgg ctcctcccgg ctgctcccgg
     2041 ctcctctctg ccctctcccg gcttcctgcg gctccggctt gggctcggcg gcggcggcgg
     2101 gcagtcgcag tggtacagaa tggccgacct cagtcttgtg gatgcgttga cagaaccacc
     2161 tccagaaatt gagggagaaa taaagcgaga cttcatggct gcgctggagg cagagcccta
     2221 tgatgacatc gtgggagaaa ctgtggagaa aactgagttt attcctctcc tggatggtga
     2281 tgagaaaacc gggaactcag agtccaaaaa gaaaccctgc ttagacacta gccaggttga
     2341 aggtatccca tcttctaaac caacactcct agccaatggt gatcatggaa tggaggggaa
     2401 taacactgca gggtctccaa ctgacttcct tgaagagaga gtggactatc cggattatca
     2461 gagcagccag aactggccag aagatgcaag cttttgtttc cagcctcagc aagtgttaga
     2521 tactgaccag gctgagccct ttaacgagca ccgtgatgat ggtttggcag atctgctctt
     2581 tgtctccagt ggacccacga acgcttctgc atttacagag cgagacaatc cttcagaaga
     2641 cagttacggt atgcttccct gtgactcatt tgcttccacg gctgttgtat ctcaggagtg
     2701 gtctgtggga gccccaaact ctccatgttc agagtcctgt gtctccccag aggttactat
     2761 agaaacccta cagccagcaa cagagctctc caaggcagca gaagtggaat cagtgaaaga
     2821 gcagctgcca gctaaagcat tggaaacgat ggcagagcag accactgatg tggtgcactc
     2881 tccatccaca gacacaacac caggcccaga cacagaggca gcactggcta aagacataga
     2941 agagatcacc aagccagatg tgatattggc aaatgtcacg cagccatcta ctgaatcgga
     3001 tatgttcctg gcccaggaca tggaactact cacaggaaca gaggcagccc acgctaacaa
     3061 tatcatattg cctacagaac cagacgaatc ttcaaccaag gatgtagcac cacctatgga
     3121 agaagaaatt gtcccaggca atgatacgac atcccccaaa gaaacagaga caacacttcc
     3181 aataaaaatg gacttggcac cacctgagga tgtgttactt accaaagaaa cagaactagc
     3241 cccagccaag ggcatggttt cactctcaga aatagaagag gctctggcaa agaatgatga
     3301 gtcctctgca gaaatacctg tggctcagga gacagtggtc tcagaaacag aggtggtcct
     3361 ggcaacagaa gtggtactgc cctcagatcc cataacaaca ttgacaaagg atgtgacact
     3421 ccccttagaa gcagagagac cgttggtgac ggacatgact ccatctctgg aaacagaaat
     3481 gaccctaggc aaagagacag ctccacccac agaaacaaat ttgggcatgg ccaaagacat
     3541 gtctccactc ccagaatcag aagtgactct gggcaaggac gtggttatac ttccagaaac
     3601 aaaggtggct gagtttaaca atgtgactcc actttcagaa gaagaggtaa cctcagtcaa
     3661 ggacatgtct ccgtctgcag aaacagaggc tcccctggct aagaatgctg atctgcactc
     3721 aggaacagag ctgattgtgg acaacagcat ggctccagcc tccgatcttg cactgccctt
     3781 ggaaacaaaa gtagcaacag ttccaattaa agacaaagga actgtacaga ctgaagaaaa
     3841 accacgtgaa gactcccagt tagcatctat gcagcacaag ggacagtcaa cagtacctcc
     3901 ttgcacggct tcaccagaac cagtcaaagc tgcagaacaa atgtctacct taccaataga
     3961 tgcaccttct ccattagaga acttagagca gaaggaaacg cctggcagcc agccttctga
     4021 gccttgctca ggagtatccc ggcaagaaga agcaaaggct gctgtaggtg tgactggaaa
     4081 tgacatcact accccgccaa acaaggagcc accaccaagc ccagaaaaga aagcaaagcc
     4141 aattacagaa gctaaggttg ccgaaaagcg gacctctcca tccaagcctt catctgcccc
     4201 agccctcaaa cctggaccta aaaccacccc aaccgtttca aaagccacat ctccctcaac
     4261 tcttgtttcc actggaccaa gtagtagaag tccagctaca actctgccta agaggccaac
     4321 cagcatcaag actgagggga aacctgctga tgtcaaaagg atgactgcta agtctgcctc
     4381 agctgacttg agtcgctcaa agaccacctc tgccagttct gtgaagagaa acaccactcc
     4441 cactggggca gcacccccag cagggatgac ttccactcga gtcaagccca tgtctgcacc
     4501 tagccgctct tctggggctc tttctgtgga caagaagccc acttccacta agcctagctc
     4561 ctctgctccc agggtgagcc gcctggccac aactgtttct gcccctgacc tgaagagtgt
     4621 tcgctccaag gtcggctcta cagaaaacat caaacaccag cctggaggag gccgggttca
     4681 gattcagaac aagaaagtgg acatatccaa ggtctcctcc aagtgtgggt ccaaagctaa
     4741 tatcaagcac aagcctggtg gaggagatgt caagattgaa agtcagaagt tgaacttcaa
     4801 ggagaaggcc caagccaaag tgggatccct tgataacgtg ggccacttgc ctgcaggagg
     4861 tgccgtgaag gtaactgagg gcggtggcag tgaggccctt ccgtgtccag gcccccccgc
     4921 tggggaggag ccagtcatcc ctgaggctgc gcctgacgct ggcgccccta cttcagccag
     4981 tggcctcagt ggccacacca ccctgtcagg gggtggtgac caaagggagc cccagacctt
     5041 ggacagccag atccaggaga caagcatcta atgatgacat tctggtctcg tcttccatct
     5101 cccctgtgtt ccctctcttg tctccccccc ttgttaccct ctcccatccc tcctcacgtg
     5161 tcactgcaga ttgagaccta caggctgacg ttccgggcaa atgccagggc ccgcaccgac
     5221 catggggctg acattgtctc ccggcctccc cacttccctg gtggcccaag cttggggtct
     5281 cgagccctgg gctccttttc ccgggctgtc tactagactt gtaagctctt gggtgctggg
     5341 cagccccttt aggcctccct ccctcctgcc tcgcttgctc aaggcagcag cagccccact
     5401 cgctgccatt acacctcctt ccaccccttt ctgggccaac tccaacttca ctatctcacc
     5461 acttcaccac tgcaccacgg agaaagttgg gcggggacgg gagtccagtg ggatctctgt
     5521 gggatctagg ggtgaggagc tggattccag ccttggctgt ttggtttttt tggaccaaac
     5581 ccaaaagaaa ctgacaaacc tctcttccct ggctcaacct ggagggactg gtaaaggtga
     5641 actccacgtg gagaccagca ccgactgaat ccctggaacc taaaccactc cttgacccca
     5701 cggggtggaa gccaccattt ggtggtacca ggcccttttg ctgcctcacc tcaagttagt
     5761 caaggatcag tcctccttgt ccccacgact tatcgtacct gagtagctgc tgtctcactt
     5821 ttttattctt tcctctccca ataacctatg aactggtggt gtagtttgca ggctgaagcc
     5881 atgtctaaat gagagttctt ggtaggtggt gagggaagtg gggaaggaga tcccgagtct
     5941 ccactgagga ggctgtcaga tattggcggg ggttgcccta ctctgggcag cttgggccct
     6001 gcaggaagaa gtgaagtcag acagctaggg tgggtcagtg tggctgattg tgttggtatt
     6061 gtgtgtatgc tgcttttcta accaagaggc tggttttggc atctatctca ttccctggga
     6121 atgcggtggt taaatgtgtg atacaaaatc agggctggag aaacagaaat gaaggtcaaa
     6181 atcgctggcc tgtacctaca ggccatagca cccaaatcct catatctagg ggagcctgaa
     6241 atgtccagaa cgcttgtgaa cagtggggaa tcaggtgtga aaatttaaaa ctaaaatgca
     6301 tgagactgag gccatccagt cttctggtgt ggcgggagag gtggagccat ggtggtgcag
     6361 ccatcccagc gtggtctgct catggatggg atggttgcaa tgttgagaaa atcccgggaa
     6421 ttttatcaac acaagattct tattgcactt gtattttttg tattaaagtt tgcatggttt
     6481 ctaataaagg attcaaacct aagtttgtat tgaaatggcc tgggagtgtc taagggctcc
     6541 tctgataggg cattttctgc tgggcagatt tgcctctcag gaggctggcc cagacttggt
     6601 ccccttggcc ctcctccgaa cagactctgc ctttgcttgg gtacagtttg aggaggtaga
     6661 ggtctttact ctctctctgc caagggaagg tatccctggg cttgaaggtc ttctccattt
     6721 atgaggtagc agttactttg tgataatctt gacactgaat ccctagctct ctaagcacac
     6781 acaaagaatt gctgggacct gtggaaaaaa gactgcctga gctggggagt ggctttcttc
     6841 ccaagctgtc agaactaagc ttggagcctg cattgtctgt attttgcagc aataggggcc
     6901 cacggagctg ggaaggacac agtggggacc agggtagtga tgactgagcg tatacaggta
     6961 cttgctaccc tccttgatgt tgatcttagg gccttgaaga tgctaaggaa attgacaaga
     7021 aacaagtcca ttggccaagg attagagaaa ggaaggtaac ccaagctctg taggtagctc
     7081 cctggaagga tcccacgagc cagagaacct gagaaggctg gtctagcagc ttgggaccac
     7141 aggccatgtg atgtgcatac ttcaaaatgt ttgggaataa ggtccttctg tattttatag
     7201 tttgctcatg gcttagccat tacccatgtc tgtaattgtt gtactgattt aaacaataaa
     7261 gctgcctgac atcccacca
//
