LOCUS       NM_026968               1107 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus mannosidase, beta A, lysosomal-like (Manbal), mRNA.
ACCESSION   NM_026968 XM_130628
VERSION     NM_026968.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Timmermans,S. and Libert,C.
  TITLE     Overview of inactivating mutations in the protein-coding genome of
            the mouse reference strain C57BL/6J
  JOURNAL   JCI Insight 3 (13), 121758 (2018)
   PUBMED   29997285
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX510908.8.
            
            On Jul 21, 2009 this sequence version replaced NM_026968.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC013803.1, AK007599.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-47                BX510908.8         38993-39039
            48-253              BX510908.8         50448-50653
            254-1107            BX510908.8         67309-68162
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 78.29 cM"
     gene            1..1107
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /note="mannosidase, beta A, lysosomal-like"
                     /db_xref="GeneID:69161"
                     /db_xref="MGI:MGI:1916411"
     exon            1..47
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            48..253
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..361
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /codon_start=1
                     /product="protein MANBAL"
                     /protein_id="NP_081244.2"
                     /db_xref="CCDS:CCDS38304.1"
                     /db_xref="GeneID:69161"
                     /db_xref="MGI:MGI:1916411"
                     /translation="MASDLGFSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIVPI
                     PKSHEAEAEQAEPRSAEGPKKPKVAIASTNKRPKKETKKKR"
     exon            254..1107
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1086..1091
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1107
                     /gene="Manbal"
                     /gene_synonym="1810024K12Rik"
                     /note="major polyA site"
ORIGIN      
        1 gggtcacgag ggatcacttc cggtgcggcg gcgcggcgtt ccgggagaag ttggtgctgg
       61 agagtggtga atctcgaggt gcctggcagt ggtgccttgg gccatggcct ccgacctggg
      121 cttctcacct cccgaggtgc ctgagcccac cttcctggag aacctgctgc ggtatggact
      181 cttcctggga gccatcttcc agctcatctg tgtcctggcc atcatcgtac ccattcccaa
      241 gtcccatgag gcggaggcag aacaggctga gcccagaagt gcagaggggc caaagaagcc
      301 caaggttgcc atcgcttcca ccaacaagag gccgaagaag gagacgaaga agaagcgata
      361 gaatcctaga atccgaggcc gaggagccca aggctgcagc ctcggggaca gccctcctgg
      421 gaaccagcat cctgtttgct ctcacagact gtctctgtcc tcggctcaga gtctgagagg
      481 attgaaactc cctctgacta cagagctctg aacagtcctt aggctccagc tgtgcagacc
      541 accacttcct cttctttctc tctgtggtgc acgggagatt ctcaagagca aacactgccc
      601 cgagggttcc gagtcaggtc aggctcacag ggcaacgtat tcacattagt cctggagtcc
      661 agtgggctcg agacctgagc ctcactaaca gcatggaatt gttgcctaag gctgcaggca
      721 taccctctcc ctgtgcttgg gccacatttg tcttttgtga gcacagaact tcacacgtgt
      781 tcaggtcagg atgcatggcc gtgcagtgtg agccagccag gtcctgaaga tgttgggggt
      841 tggggggtga ggggggcgga cagtagaagg cctgggccca gtggtgcctg caggggaagg
      901 tacagctgaa tgaggccaga tttcctgggc acagactttg taagcctttg aagcaggctt
      961 gtccctttca caccaacctc cttttaaccc agttaacatt caaagtgcct ttgacttcaa
     1021 ccagtcctcc ccacatctcg tattccctga ccagtgaagg aaaatgatgt ggagaagtca
     1081 aagtaaataa agtgtcctgc atgctga
//
