LOCUS       NM_001199997            1931 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus MAGE family member C2 (Magec2), transcript variant 2,
            mRNA.
ACCESSION   NM_001199997 XM_003085261
VERSION     NM_001199997.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1931)
  AUTHORS   Garcia TX, Farmaha JK, Kow S and Hofmann MC.
  TITLE     RBPJ in mouse Sertoli cells is required for proper regulation of
            the testis stem cell niche
  JOURNAL   Development 141 (23), 4468-4478 (2014)
   PUBMED   25406395
REFERENCE   2  (bases 1 to 1931)
  AUTHORS   Shalom-Barak T, Zhang X, Chu T, Timothy Schaiff W, Reddy JK, Xu J,
            Sadovsky Y and Barak Y.
  TITLE     Placental PPARgamma regulates spatiotemporally diverse genes and a
            unique metabolic network
  JOURNAL   Dev Biol 372 (1), 143-155 (2012)
   PUBMED   22967998
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY074679.1 and AL831775.6.
            
            On Jan 13, 2011 this sequence version replaced XM_003085261.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR compared
            to variant 1. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CJ084090.1, BY081158.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-275               BY074679.1         2-276
            276-1931            AL831775.6         5649-7304
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 34.57 cM"
     gene            1..1931
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /note="MAGE family member C2"
                     /db_xref="GeneID:74437"
                     /db_xref="MGI:MGI:1921687"
     exon            1..55
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            56..144
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            145..217
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            218..1931
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             229..1518
                     /gene="Magec2"
                     /gene_synonym="4933402E13Rik"
                     /note="Novel transcript similar to melanoma-associated
                     antigen 11 (MAGE-11 antigen)"
                     /codon_start=1
                     /product="melanoma-associated antigen 11-like"
                     /protein_id="NP_001186926.1"
                     /db_xref="CCDS:CCDS53078.1"
                     /db_xref="GeneID:74437"
                     /db_xref="MGI:MGI:1921687"
                     /translation="MSRYGKHPRLSLEEGVNFQNPTETDDDDVVFPVLPTAEKDEREG
                     EEEVLKEDEDGNKQETEEDNVEKEDEDEEKEKEEEKEESGDEVNEEEDETREEEDISS
                     MILSSSNVSLAAFSPPSPSSSSSSSIFSSSSSSSSLFSLFQSNLVENEGFAIGMLGLF
                     QNAQSFFPLPTLGGNLDEAAGYQEESSGVIASPEDPDSLLDTVIQEKATDLVFLFIYK
                     YRVKEPITLTEMHEVVTKEYENHFPVIFIEASKCLEMTFGIDIKESDLVSSAYVLVNS
                     LNLTYEDTLSDSDRLPRNAFLIVILGVIFIEGNCASEDRIWEFLKLVGVYDGEEHFIC
                     GDPREFLTIHLVQQNYLEYREVPNSQPPCFEFLWGPRAYAETTKMKVLEFLAKMNGCD
                     PSDFSIWYEEALRDEEERAWALNDSANTSPNAWFVER"
ORIGIN      
        1 aggcggctct gtgctttagc cattttagct ctgtgctcca tgcctgaagt ctaaggaagt
       61 aaacatcttg attggaagag aaagctacgt gggaaaaggg aatagcagat caccagaggg
      121 aaaaatctgc ctggagttca tcaggttcct aaaggacaag ctaggtagaa aaggctgcag
      181 aactctgagg ctattccaca tcacctggag aaaactgaaa gcaacacaat gtctcgctac
      241 ggaaagcacc cacgcctcag tctggaagaa ggtgtcaact tccagaatcc aacggaaact
      301 gatgacgatg atgtggtgtt cccagtactt cccacagccg agaaagatga gagagaggga
      361 gaggaggagg tcctaaagga agatgaagat ggcaataagc aggagacaga ggaagataac
      421 gtcgagaagg aagacgaaga cgaagaaaag gagaaagaag aggaaaagga agagtctggt
      481 gatgaagtga atgaagaaga agatgagacc agagaggaag aagacatatc ttccatgatt
      541 ttgtcatctt ctaatgtctc tttagctgct ttctcccctc cttctccttc ttcttcttcc
      601 tcctcctcca tcttctcttc ttcctcttcc tcctcttccc tcttttctct gtttcagagc
      661 aacctggtgg agaatgaggg ctttgctatt gggatgctgg gcctttttca gaatgctcag
      721 agcttcttcc ccttacctac tttgggggga aatttagatg aagcagctgg ttaccaggaa
      781 gagagttcag gtgtcatagc atctccagaa gaccctgact ccttgctaga tactgtaata
      841 caagaaaagg ctactgattt ggtgttcctt ttcatttaca agtatagagt gaaggaacct
      901 atcacattaa ctgagatgca tgaggttgtc actaaggaat atgagaacca ctttcctgtc
      961 attttcatcg aagcttctaa atgcttggag atgacctttg ggattgatat aaaggaaagt
     1021 gatctggtaa gcagtgctta tgtcttggtc aactcactga accttaccta tgaggatacg
     1081 ctgagtgaca gcgataggct gcctagaaat gcttttctga tagttattct gggtgtaata
     1141 ttcatagaag ggaactgtgc ttctgaagat agaatctggg agttcttgaa actggtggga
     1201 gtgtatgatg gggaagagca cttcatttgt ggggatccca gggagttcct caccatacat
     1261 ctagtgcagc aaaattacct ggagtatcgg gaggtgccta acagccagcc tccatgcttt
     1321 gagttcctgt ggggtccaag agcctatgct gaaactacca agatgaaagt tttggaattc
     1381 ttggcaaaga tgaatgggtg tgacccatct gatttctcaa tctggtatga agaggcttta
     1441 agagatgagg aagagagggc ctgggcctta aatgattctg caaatacaag cccaaatgcg
     1501 tggtttgtcg agcgctgatc actggtttct cttatccagt gtgagggatc ccttttggca
     1561 tggattcact ctaactttga atagagcagt caaaatttta agtaatgaaa atcaaactta
     1621 ggctcagtag aacagtatca ttatgctaat tagggttttc ttaactgttt catttggggt
     1681 tactgttaaa tgttactcat tttaagggaa agtgtattat ctctaaaatt tgtcattgaa
     1741 actgataaca caattattac tgtttgttta aaaatatagt ggaaaaatta tgtaaggtta
     1801 ccttttgatt tctttagtcc ttttattctc ttctggaaaa tttaaatgtg gtatgcattt
     1861 attttccaga ctaatgtaag aaaatacgat gtaataacaa atcttaataa agactgctca
     1921 cttattcact c
//
