LOCUS       NM_001113734            1725 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus MAGE family member B16 (Mageb16), transcript variant
            2, mRNA.
ACCESSION   NM_001113734
VERSION     NM_001113734.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Gordeeva,O., Gordeev,A. and Khaydukov,S.
  TITLE     Expression dynamics of Mage family genes during self-renewal and
            differentiation of mouse pluripotent stem and teratocarcinoma cells
  JOURNAL   Oncotarget 10 (35), 3248-3266 (2019)
   PUBMED   31143371
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Gaspar,J.A., Srinivasan,S.P., Sureshkumar,P., Doss,M.X.,
            Hescheler,J., Papadopoulos,S. and Sachinidis,A.
  TITLE     Depletion of Mageb16 induces differentiation of pluripotent stem
            cells predominantly into mesodermal derivatives
  JOURNAL   Sci Rep 7 (1), 14285 (2017)
   PUBMED   29079788
  REMARK    GeneRIF: Mageb16 (41 kDa) is distributed in cytosol and/or in
            surface membrane in undifferentiated murine embryonic stem cells
            (ESCs). A transcriptome study performed at differentiated short
            hairpin RNA (shRNA)-mediated Mageb16 knockdown (KD) ESCs and
            scrambled control ESCs until a period of 22 days, revealed that
            Mageb16 KD ESCs mainly differentiated towards cells expressing
            mesodermal and cardiovascular lineage - gene markers.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ081836.1, AK010362.1 and BY387905.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR compared
            to variant 1. Both variants encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK167347.1, BY736829.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-282               CJ081836.1         2-283
            283-1721            AK010362.1         413-1851
            1722-1725           BY387905.1         460-463
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 38.38 cM"
     gene            1..1725
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /note="MAGE family member B16"
                     /db_xref="GeneID:71967"
                     /db_xref="MGI:MGI:1919217"
     exon            1..92
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            93..172
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            173..1725
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1699..1704
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /note="hexamer: AATAAA"
     regulatory      1709..1714
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      1722
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
     polyA_site      1725
                     /gene="Mageb16"
                     /gene_synonym="2410003J06Rik"
                     /note="major polyA site"
ORIGIN      
        1 gacgtttcga agtgacccgc tgggaaggaa gaccttgttg aaaagccgct gaagctggtt
       61 taccgaaaag ttgaaagaga gaattgtctc agtgaggtgt ggccttcaac tggaagcact
      121 gaagccagac aattagaggg aagattcaaa ggaggtgctc tcaggattta agtcaccatg
      181 tctcagtctt cagaagaatg tgcagctgac caaggccaga cctgtgaaga gacccagaaa
      241 ctacaggttg cagcagcctc catcgatgtt gaggagccat gttcctcacc tcatcttatg
      301 gctactagtc tgaaggacca gaccagtgag gagacccaag tctccaagga tgtggaggaa
      361 ccatgttcct cttctcaact tcttatggct agcgaccagg atgattctga agatgagaca
      421 gccagtactt ccagtgatct tcagcatccc tatgactctt caagcgagtc tactgaggat
      481 cttgatgacc aagaagtgca gggtagccca gtcattccac cagatcagtc agatagcaca
      541 gatttacctg tgatgactgt agatgggaaa gttgatttct tggtgaatta catgctgtac
      601 aagtatcagg tgaaagaggt gatgagtatg aatgatataa tgacactcat tgtcagagag
      661 gatgaagatc gttttcatga aatcctcatg agagcttctg agcgcatgga gatggtcttt
      721 gggctggatg tgaaggaagt agatcctatc aaccattgct atgctctctt tatcaaatta
      781 ggtctcacct atgatgggat gcgcaatgat gagtacagct ttcctaaaac tggtctcctg
      841 atactcatcc tgggtgtagt ctttatgaag ggcaaccgtg ccactgaaga ggagatttgg
      901 gaagtattga atccaatggg aatctatgct gggatgactc atttcatgtt tggtgaccct
      961 agagagctga taactgatga gtttgtgagg gagcaatacc tggaatacca gccaatagcc
     1021 aatagtgatc ccatacagta tgaatatgtg tgggggctac gggctaaagc tgaaactagt
     1081 aagatgagag tgttagagtt tgtggccaag gttcatgggt cagaccctac tgtgttcctt
     1141 tctcagtatg aagaggcact gattgaagaa gaagagagaa cccttaccat gctattagag
     1201 catgctgatt caagttctac ttctggtgaa agttctagtg acacaagcag caacttctct
     1261 caggtctagt acagtcagag atcagttcct tctgtataat ttacagagaa tttttaaact
     1321 tgcggggaaa gatgtacgac ctagattgta tagggagaag ggagcgtctt agctgcatag
     1381 ttctaatttg tataagcacc atgccatgtt tttcattgtt tgccctttat atatgaaaat
     1441 acttacactt aaaagcattg ttgtttagtt tcaaaatctc aacttaatac cattcacaaa
     1501 tttaataaga gcgttgtcat aacataaaac taattgggaa ataatcccat ctatctgtac
     1561 agttatctgg aatagtaaaa catgcgtttt ctaagcttct accttttaaa cagctttctt
     1621 ctaattactc cctttgtacc tttccatttc tcagtaaaat tacatgctct atgtggagtt
     1681 gtttacttta tagttgccaa taaaattcaa gaaagtttgc ctcaa
//
