LOCUS       NM_026963               1859 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus leucine zipper and CTNNBIP1 domain containing (Lzic),
            transcript variant 1, mRNA.
ACCESSION   NM_026963
VERSION     NM_026963.6
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Clements,W.K. and Kimelman,D.
  TITLE     LZIC regulates neuronal survival during zebrafish development
  JOURNAL   Dev Biol 283 (2), 322-334 (2005)
   PUBMED   15932753
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK146824.1 and AW047580.1.
            
            On Sep 29, 2017 this sequence version replaced NM_026963.5.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Variants 1 and 2 encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146824.1, AK007657.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1842              AK146824.1         1-1842
            1843-1859           AW047580.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 79.53 cM"
     gene            1..1859
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /note="leucine zipper and CTNNBIP1 domain containing"
                     /db_xref="GeneID:69151"
                     /db_xref="MGI:MGI:1916401"
     exon            1..734
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            735..843
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             743..1315
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /note="leucine zipper and CTNNBIP1 domain-containing
                     protein; leucine zipper and ICAT homologous
                     domain-containing protein"
                     /codon_start=1
                     /product="protein LZIC"
                     /protein_id="NP_081239.1"
                     /db_xref="CCDS:CCDS18961.1"
                     /db_xref="GeneID:69151"
                     /db_xref="MGI:MGI:1916401"
                     /translation="MASRGKTETSKLKQNLEEQLDRLMQQLQDLEECREELDADEYEE
                     TKKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAAISQAFKTPEVIRLFAKKQ
                     PGQLRTRLAEMDRDLMVGKLERELYTQRKVEILTALRKLGEKLTEDDETFLSANASAV
                     LSQFEKVSTELGSGDKVLALAGFDVEKAKK"
     exon            844..979
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1078
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1174
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1256
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1257..1845
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1821..1826
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /note="hexamer: AATAAT"
     polyA_site      1845
                     /gene="Lzic"
                     /gene_synonym="1810030J04Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggagtcaggt aggcggggcc cctggttcca aaccctggga tccgctagcg ggcggcaggc
       61 ggggatcggg agggcgaagg aggttgtcct gttttccgat cagggaggac ggagaagcgt
      121 ttcgcaggcg taggactccc cgcctcctca ggtgaccacc gggcctgctg gagcccggcc
      181 ttggcgggac ctgcacacct cggcgggagc ttggagttcg tctgtccgcg gggaggaggc
      241 cggcatccga gcgtgcggtc cggctctgcc ttatttttgc tccggtggtc ccgggcccgg
      301 gctttgctca cctccgtccc tgagaaggtg tgctttctgc ccttgccttc tcgtgcgtct
      361 gagttggaca gttttcctca agccgagtcc cgagtgctgt ggcctcaccc agaggagact
      421 cggcaaaagc tacgggaggc acagcccagg gattcagtgg cctctcccgc gtcttcctag
      481 gaatggagaa cgtatttcag ttacagtctg cttagcggga agtgatctgg acagctgtag
      541 gccaagttca gacacagcaa ataaaactct taacagtttt accttgttct agccagctcc
      601 accccaggag gtttgaagtt tgagcctccg gtaaacttta tgacaacttc gctttcctca
      661 aattgatgac actcagagct ccgacagttg gcgagttttg agcaccgtgc acgggacagg
      721 atactggaac cccgtgatta aaatggcttc cagaggaaag acagagacaa gcaaactaaa
      781 gcagaattta gaagagcagt tggatagact gatgcagcag ttacaagacc tggaggaatg
      841 cagggaggag ctcgatgcgg atgaatatga agaaactaaa aaggaaactt tggagcagct
      901 gagtgagttc aacgattcgc tgaagaagat tatgtcagga aatatgactt tggtagatga
      961 actcagtggg atgcaactgg ccatccaggc agccatcagc caggccttta aaactcctga
     1021 agtcatcaga ttgtttgcga agaaacaacc aggccaactt cggacaaggc tagccgagat
     1081 ggacagagat ctgatggtgg ggaagctgga aagagagctg tatacccagc ggaaggtgga
     1141 gatactgaca gcactcagga aactcggaga gaagctgaca gaagacgatg agaccttcct
     1201 gtcagccaat gcaagtgctg tgctcagcca gtttgaaaaa gtctccacag agcttggctc
     1261 tggagacaag gtccttgctc tggcagggtt cgatgttgaa aaagccaaga aatgacggcg
     1321 tggtgggttt ggctctgccg gccccacccc tcctgcacac ggtgcttcca tcctgaggac
     1381 tcaggccaca caaagctgta gagactctca caatgcagca acagcccagg aacaggtgac
     1441 ttggaacaca gtgtggcttc tgcctagggt cctcgtccct ctctctgtgg atctcccttc
     1501 ttacgtgacc ccaggcttgt tggacagagg gacattgttc actatgattc gttttgttaa
     1561 gatatcttgg ttttagtgct gataggtgtg agagctatga gctaagactg tcctgacctc
     1621 tgtctgcatg ccttgggatg gacagcagtg atgtccctgg ccctcctgtg gctggagaat
     1681 cttttcagtt tttatacaag gaaaccaaga cttagcactt gtgatgtcta aagtcacatt
     1741 agaggcagag ctgaggctgg ggctcaggtg tcctgaatcc aagttttact tctttattct
     1801 gtactgtttt atatatatat aataattaac ttgtatttgt gcaaaaaaaa aaaaaaaaa
//
