LOCUS       NM_001356472             815 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus lysozyme-like 6 (Lyzl6), transcript variant 2, mRNA.
ACCESSION   NM_001356472 XM_006534115
VERSION     NM_001356472.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Wei,J., Li,S.J., Shi,H., Wang,H.Y., Rong,C.T., Zhu,P., Jin,S.H.,
            Liu,J. and Li,J.Y.
  TITLE     Characterisation of Lyzls in mice and antibacterial properties of
            human LYZL6
  JOURNAL   Asian J Androl 15 (6), 824-830 (2013)
   PUBMED   24013621
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY092087.1, AK006279.1 and AV254473.1.
            
            On May 8, 2018 this sequence version replaced NM_001356472.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006279.1, SRR5189685.274538.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BY092087.1         2-11
            11-808              AK006279.1         2-799
            809-815             AV254473.1         230-236
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 67.4 cM"
     gene            1..815
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /note="lysozyme-like 6"
                     /db_xref="GeneID:69444"
                     /db_xref="MGI:MGI:1916694"
     exon            1..67
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /inference="alignment:Splign:2.1.0"
     exon            68..253
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..561
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /EC_number="3.2.1.17"
                     /note="lysozyme-like protein 1; lysozyme-like protein 6;
                     lysozyme b"
                     /codon_start=1
                     /product="lysozyme-like protein 6 precursor"
                     /protein_id="NP_001343401.1"
                     /db_xref="CCDS:CCDS25519.1"
                     /db_xref="GeneID:69444"
                     /db_xref="MGI:MGI:1916694"
                     /translation="MLKALFICVASCLLVVNDGNIIHRCSLAKILYEEDLDGFEGYSL
                     PDWLCLAFVESNFNISKVNENVDGSFDYGIFQINSRYWCNDYQSHSENFCHVDCQELL
                     SPNLISTIHCAKKIVSGPGGMKNWVEWKLHCLGRPLSYWMTGCHLG"
     exon            254..412
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /inference="alignment:Splign:2.1.0"
     exon            413..491
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /inference="alignment:Splign:2.1.0"
     exon            492..815
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /inference="alignment:Splign:2.1.0"
     regulatory      789..794
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /note="hexamer: AATATA"
     polyA_site      814
                     /gene="Lyzl6"
                     /gene_synonym="1700023H08Rik; Lyc1; Lyzb"
                     /note="major polyA site"
ORIGIN      
        1 ggccaagaac acatgccttc ttgagacgaa ggagaactat tagccagatg gggccagaga
       61 gtgcttgatc ccccaggctc tcagagactg cctagtgccc tgtctccttg gacaatgttg
      121 aaggcactgt tcatctgtgt ggcaagctgc cttctggtag tgaatgatgg caacatcatc
      181 catcgctgta gtttggccaa gattctgtat gaagaggact tggatgggtt tgagggctac
      241 tccctgcctg actggctgtg cttggctttt gtggaaagca acttcaacat atcaaaggtg
      301 aacgagaacg ttgatggtag cttcgactat ggcatcttcc agatcaacag tcgttactgg
      361 tgcaacgact accagagtca ttcggagaac ttctgccatg tcgactgtca agaactactg
      421 agtcccaacc tcatttcaac cattcactgt gcaaaaaaga ttgtgtctgg accaggaggg
      481 atgaagaact gggtagaatg gaaattgcac tgtttaggac gaccactctc ctactggatg
      541 acgggatgcc atctgggatg agccagggtg cagacctact ggggagtcac tccaggaccc
      601 ctgtactcct tggacattct tcactatttc attgtcttgc cttcacccgt tacttttttc
      661 tcttcccact tgcaagtaaa actgaccaga gtcctggagg gaaatatctt acctcggctc
      721 cctgcttgtg ttcagccagg cccagttcct ctgttcctat catttgtaaa ccaagaagat
      781 gtcaaataaa tataattata gttttcaaaa tttat
//
