LOCUS       XM_006521312             622 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Ly6/Plaur domain containing 2 (Lypd2),
            transcript variant X1, mRNA.
ACCESSION   XM_006521312
VERSION     XM_006521312.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..622
                     /gene="Lypd2"
                     /gene_synonym="0610005K03Rik; Lypdc2; VLL"
                     /note="Ly6/Plaur domain containing 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     mRNAs, 30 ESTs, 4 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:68311"
                     /db_xref="MGI:MGI:1915561"
     CDS             151..534
                     /gene="Lypd2"
                     /gene_synonym="0610005K03Rik; Lypdc2; VLL"
                     /codon_start=1
                     /product="ly6/PLAUR domain-containing protein 2 isoform
                     X1"
                     /protein_id="XP_006521375.1"
                     /db_xref="GeneID:68311"
                     /db_xref="MGI:MGI:1915561"
                     /translation="MQGTWMVLLALILGTFGELAMALQCYTCANPVSASNCVTTTHCH
                     INETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCNVD
                     GAPSLGSPGGLLLALALFLLLGVLL"
ORIGIN      
        1 ttcagaggag ctgggaggtg caagatcatc ttggaaagat tccatccaag agctgctggg
       61 ccaaagctct ggagaaggcc acaagccaac cggtcagacc accgctgtag gcatttcccc
      121 accaggcagg cctgagtgag gacctcgacc atgcagggga cctggatggt gctgttggca
      181 ctgatattgg gcaccttcgg ggagcttgct atggccttac agtgctacac ctgtgcgaat
      241 cctgtgagtg catccaactg tgtcaccacc acccactgcc acatcaatga aaccatgtgc
      301 aagactacgc tctactccct ggagattgtt ttccctttcc tgggggactc cacggtgacc
      361 aagtcctgcg ccagcaagtg tgagccttcg gatgtggatg gcattgggca aacccggcca
      421 gtgtcctgct gcaattctga cctatgcaac gtggatgggg cacccagcct gggcagtcct
      481 ggtggcctgc tccttgccct ggcacttttc ttgctcttgg gtgtcctgct gtaaagccat
      541 ggccatctag ctccactccc ttgtccctga catcccagtt ccctaatgcc tagaagaaat
      601 acaatggcca tctgcatggg tc
//
