LOCUS       NM_025929               1887 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus lymphocyte antigen 6 family member M (Ly6m), mRNA.
ACCESSION   NM_025929
VERSION     NM_025929.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S and
            Swamynathan SK.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Stier MT and Spindler KR.
  TITLE     Polymorphisms in Ly6 genes in Msq1 encoding susceptibility to mouse
            adenovirus type 1
  JOURNAL   Mamm Genome 23 (3-4), 250-258 (2012)
   PUBMED   22101863
REFERENCE   3  (bases 1 to 1887)
  AUTHORS   Simmonds CS, Karsenty G, Karaplis AC and Kovacs CS.
  TITLE     Parathyroid hormone regulates fetal-placental mineral homeostasis
  JOURNAL   J Bone Miner Res 25 (3), 594-605 (2010)
   PUBMED   19968565
REFERENCE   4  (bases 1 to 1887)
  AUTHORS   Kitazawa H, Nishihara T, Nambu T, Nishizawa H, Iwaki M, Fukuhara A,
            Kitamura T, Matsuda M and Shimomura I.
  TITLE     Intectin, a novel small intestine-specific
            glycosylphosphatidylinositol-anchored protein, accelerates
            apoptosis of intestinal epithelial cells
  JOURNAL   J Biol Chem 279 (41), 42867-42874 (2004)
   PUBMED   15292182
  REMARK    GeneRIF: Intectin is a novel small intestine-specific
            glycosylphosphatidylinositol-anchored protein that accelerates
            apoptosis of intestinal epithelial cells
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK018552.1 and AK038164.1.
            
            On Sep 20, 2006 this sequence version replaced NM_025929.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK018552.1, AK008365.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1066              AK018552.1         1-1066
            1067-1887           AK038164.1         1043-1863
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 34.29 cM"
     gene            1..1887
                     /gene="Ly6m"
                     /gene_synonym="2010109I03Rik"
                     /note="lymphocyte antigen 6 family member M"
                     /db_xref="GeneID:67038"
                     /db_xref="MGI:MGI:1914288"
     exon            1..91
                     /gene="Ly6m"
                     /gene_synonym="2010109I03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..375
                     /gene="Ly6m"
                     /gene_synonym="2010109I03Rik"
                     /note="lymphocyte antigen 6 complex, locus M"
                     /codon_start=1
                     /product="intectin precursor"
                     /protein_id="NP_080205.1"
                     /db_xref="CCDS:CCDS27537.1"
                     /db_xref="GeneID:67038"
                     /db_xref="MGI:MGI:1914288"
                     /translation="MRTHLLWLLPLILLGSSAQALKCHECSGIEDCYKPKTCSSQSLY
                     CLTNWYTPPGQQTTVTKTCAYTCPDINHVTANSKSSCCNTDLCNSARNLHVSWGLLAL
                     GLCYIYLSQ"
     exon            92..190
                     /gene="Ly6m"
                     /gene_synonym="2010109I03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            191..1887
                     /gene="Ly6m"
                     /gene_synonym="2010109I03Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacagagac acgagctctg cttgctctca ttgcccaaga tgaggactca cctgctttgg
       61 ttgttgcccc tgattctgct gggatcctct gcccaggcgt tgaagtgtca tgaatgcagt
      121 ggtatagagg actgctacaa gcctaagact tgctccagcc agagcctcta ctgcttgacc
      181 aactggtata caccgccagg tcagcaaacg actgtgacaa aaacatgtgc atatacctgc
      241 cctgacatta atcatgtcac agccaactcc aagtcctcct gctgcaacac ggacctctgc
      301 aatagtgcca ggaacctcca cgtcagttgg ggattgctgg ccctcggcct ctgctatatc
      361 tatctcagcc agtaggtgcc gagctcccac aggggctcac aagctgcaga gttaagagtt
      421 ggagtttggt gccatcatgc aaccggaatg tgtagccatg ggtggggcac ttcttgaact
      481 ccaatcagaa ggattccaag aggcaacctc acagatgtgg ctgatagaga ccgtggcccc
      541 tgtccagagt gctgcattca gaactcttgt ctgagaggca tgtggatttc tgagttcgag
      601 gccagcctgg tctacaaagt gagctccagg acagccaggg ctacacagag aaaccctgtt
      661 tcaaaaaaac aaaacaaaac aaaacaaaac aaaacaaaac aaaaaacaga actcttgtct
      721 gcaagctggt catctgctgg cccccaagag ctggtttaag gaagctgtca cctgttactg
      781 ggggctgagg taggcccctc aggaggccca acaagctatt ttggcctggc ttttcccccc
      841 acatcccatg gctccctcta actacctcag aggaactgaa ccacttcaaa agagttgagc
      901 ttcattgcat ctgtacctgc tgactggtgg cccagtagtg aagtgtgcta ctttaacctg
      961 aattcaaaga cgcttgacag atggaaaccc tatggagagg cctcccttct ggctgtggga
     1021 gaagggcaga tgctgggaca gattagtttg aacaaggtgt gggtcagact ggtttcagta
     1081 agattgttgc acgagacgcc agccatgtag ccatgtagtc ccagcatacc tcactcctgg
     1141 ggtggaccct gaggattcta tcctgaggca acaccaagct cctcaggact tcaggagccc
     1201 ctgtgaaccc cagtctattc tggagcaaag agcatccaga actgtccaac tgtgagtgaa
     1261 gcctgaagca tttcctctct tctctgcttg tggtccagct ccaggacgcc atcagtcagc
     1321 cctagggatt gtacatcctc catcaaagag agcctgtccc cgttcagtgc gtgcctgcct
     1381 ctctcctcat ctctgaaagc ctggccaaca ccttgcccca gtgaagagaa tggatctggg
     1441 aactagattc taagctggca gcagttttgg tgggtgactc cattgactgg attctcccta
     1501 actctctaga gccaggcttg accgaaaggt gcctacatgg cattgttccc tccttcttac
     1561 acaagggtgt gttgtgaggc cctgggaacc aaaagagggc caaactcagg tgactgcctg
     1621 cttgtcacct cagtgagtgt caaagtgcag tactacttaa tgaaggcaga taggctgctc
     1681 ctggacacat gattgggaag ggcaagctgg tggacgagct cagatcctta cttggtgcag
     1741 gtcccaaggc ccctagggaa cgacagcctt ctgctgaaga gtggtgcttg gaactgaaat
     1801 ttggtagact ggagtttctt tttttttttt ttttcataaa acagtttact caaatttgag
     1861 aataaatctc cttttaaaac tgaattg
//
