LOCUS       NM_001163192            1068 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus lymphocyte antigen 6 family member G6F (Ly6g6f), mRNA.
ACCESSION   NM_001163192
VERSION     NM_001163192.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Loughner,C.L., Bruford,E.A., McAndrews,M.S., Delp,E.E.,
            Swamynathan,S. and Swamynathan,S.K.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC157908.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC157908.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849380,
                                           SAMN00849384 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.59 cM"
     gene            1..1068
                     /gene="Ly6g6f"
                     /note="lymphocyte antigen 6 family member G6F"
                     /db_xref="GeneID:433099"
                     /db_xref="MGI:MGI:3616082"
     exon            1..76
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..924
                     /gene="Ly6g6f"
                     /note="lymphocyte antigen 6 complex, locus G6F"
                     /codon_start=1
                     /product="lymphocyte antigen 6 complex locus protein G6f
                     precursor"
                     /protein_id="NP_001156664.1"
                     /db_xref="CCDS:CCDS50083.1"
                     /db_xref="GeneID:433099"
                     /db_xref="MGI:MGI:3616082"
                     /translation="MAVVVFLLFLCGHSQAVADSIQTIYVASGESVEMPCPSPPSLLG
                     GQLLTWFRSPVAGSSTILVAQVQVDKPVSDLRKPEPDSRYKLFGNYSLWLEGSRDEDA
                     GRYWCTVMDQNHKYQNWRVYDVSVLKGSQFSVKSPDGPSCAALLCSVVPARRLDSVTW
                     LEGRNTVRGHAQYFWGEGAALLLVCPTEGLPETRARRPRNIRCLLPQNKRFSFSLAAA
                     SAEPSPTVCATLPSWDVPWILVLLFTAGQGVTIIALSIVLWRRRRAQGSRDREPSVPH
                     FKPEVQVYENIHLARLSPPNHKTR"
     exon            77..406
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
     exon            407..670
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
     exon            671..832
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
     exon            833..899
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1068
                     /gene="Ly6g6f"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggaacttgg caggctcttc catggcagtt gtagtattcc tcctgttctt atgtgggcac
       61 tcccaggctg ttgcagacag catccagacc atctacgtag cctccgggga gtcagtggag
      121 atgccgtgtc cctcacctcc ctccctactt gggggccagc ttttaacctg gttccgcagc
      181 cctgtagcag gctcctccac catcttggtg gctcaggtcc aagtagacaa gccagtctca
      241 gaccttcgga aacccgaacc cgattccagg tacaaactct tcggaaatta ttccttatgg
      301 ctggaggggt ccagagatga agacgctgga cggtactggt gtactgtgat ggatcagaac
      361 cacaagtacc agaactggag ggtgtatgac gtctctgtgc ttaaaggatc ccagttctct
      421 gtgaagtctc cagatggccc ctcttgcgct gccctcctgt gctctgtggt ccctgccagg
      481 cgtctggact ctgtgacctg gctagaggga aggaataccg tgagaggaca tgctcagtac
      541 ttctggggag aaggggctgc cctgctcttg gtgtgtccca cagaggggct tcctgagacc
      601 agggcccgta ggccaaggaa tatccgctgc cttttgcctc agaacaaaag attcagcttt
      661 agcctggcag cagcttccgc ggaaccctcc cctactgttt gtgccactct cccgagctgg
      721 gacgtgccct ggatactggt gctgttgttc acagcaggcc aaggggtcac catcatagcc
      781 ctcagcatag tgctctggag gcggcggagg gcccaggggt ctcgggacag agaaccctca
      841 gttcctcatt tcaagcctga agtccaggtc tatgagaaca tccacttggc ccgccttagc
      901 ccacctaacc acaagaccag gtgatcctgg agatatctgc gtggaaaagc ctgacccaca
      961 gtcctgtgtc tctagccact ggcacctgaa ggattccctg gaactttggc caaggggtgg
     1021 ctgagggtgt gactcgtact gggcttccaa gagccaccaa gctggagg
//
