LOCUS       XM_030242182            1379 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lymphocyte specific 1 (Lsp1), transcript
            variant X5, mRNA.
ACCESSION   XM_030242182
VERSION     XM_030242182.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242182.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1379
                     /gene="Lsp1"
                     /gene_synonym="Lsp-1; p50; pp52; WP34"
                     /note="lymphocyte specific 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 16 ESTs, 32 long SRA reads, 12 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16985"
                     /db_xref="MGI:MGI:96832"
     CDS             16..1002
                     /gene="Lsp1"
                     /gene_synonym="Lsp-1; p50; pp52; WP34"
                     /codon_start=1
                     /product="lymphocyte-specific protein 1 isoform X3"
                     /protein_id="XP_030098042.1"
                     /db_xref="GeneID:16985"
                     /db_xref="MGI:MGI:96832"
                     /translation="MGSLQGAELQQGLKPADLELFLGEQRGLTTQWREEDEEEAAREQ
                     RQRERERQLQDQDKDKEDDGGHSLEQPGQQTLISLKSSELDEDEGFGDWSQKPEPRQQ
                     FWGNEGTAEGTEPSQSERPEEKQTEESSHQAKVHLEESNLSYREPDPEDAVGGSGEAE
                     EVRTPSPLALEDTVELSSPPLSPTTKLADRTESLNRSIKKSNSVKKSQPTLPISTIDE
                     RLQQYTQATESSGRTPKLSRQPSIELPSMAVASTKTLWETGEVQSQSASKTPSCQDIV
                     AGDMSKKSLWEQKGGSKISSTIKSTPSGKRYKFVATGHGKYEKVLVDEGSAP"
ORIGIN      
        1 ggagggggca gtcacatggg cagcctgcag ggggcagaat tgcaacaggg actgaagcct
       61 gccgacctgg aattattctt gggagaacaa agagggctca caactcagtg gagagaagaa
      121 gacgaggaag aggctgcccg tgagcagcgt caacgggagc gagagaggca gctacaggac
      181 caggacaaag ataaagaaga tgatggtggc cattccctgg aacagccagg acagcagaca
      241 ctcatcagcc tgaagtcctc tgaactggat gaagatgagg gttttggtga ctggtcccaa
      301 aagccggagc cacggcagca attctggggg aatgagggga ctgcagaagg gactgaaccc
      361 tctcaaagcg agagaccaga ggagaaacaa acagaggaga gttctcacca agccaaagtc
      421 cacttggagg agtcaaacct gagctacagg gagcccgatc cagaggatgc tgttgggggt
      481 tctggggagg cggaagaggt caggaccccc agccctttgg ccttagaaga caccgttgag
      541 ctgagttcac ctcccctgag ccctaccacc aaactggctg ataggaccga gtccctgaac
      601 cgctccatta aaaagagcaa cagtgtgaag aagtctcaac caaccttgcc catttccaca
      661 attgatgaac gcctgcagca gtatacccag gccactgagt cttctggccg aactcctaag
      721 ctgtcccgcc agccctccat agagctgccc agcatggccg tagccagtac caagactctt
      781 tgggaaacag gagaagtgca gagtcagtct gcttctaaga caccctcctg ccaggatata
      841 gtagctggag acatgagcaa gaaaagtctg tgggagcaga aaggaggctc caagatctca
      901 tccaccatca agagcacccc atctggaaag cggtacaagt tcgtggccac tggacatggg
      961 aagtacgaga aagtacttgt ggatgagggc tcagcaccat agaccatgtt tgcatcctga
     1021 ctccggccgg atgccactcc cagccctgac caagaaattg cttcctgttg ccagtctggc
     1081 ctgctctcct gcctccaaca accaagctgc cgatagcctc tccttttgct cctggaccct
     1141 ccatcttctc ttccctctca tcctttgacc aaccctccaa ctctgcttct caccatcagc
     1201 taaagggacc agtccctagg ggagccaaga gctcccaagg aaggatgaag gagagaaggc
     1261 aagcatccca accagatcca aggggacact gtccccatgc tgaatgctca ggactcttgg
     1321 gtcctgccct gtttacggat ccctcatttt gtgtaataaa gtgcattgag tgtccccta
//
