LOCUS       XM_006502686             833 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus U7 snRNP-specific Sm-like protein LSM10
            (Lsm10), transcript variant X2, mRNA.
ACCESSION   XM_006502686
VERSION     XM_006502686.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Dec 6, 2023 this sequence was replaced by
            NM_001426133.1.
            
            On Aug 8, 2019 this sequence version replaced XM_006502686.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..833
                     /gene="Lsm10"
                     /note="U7 snRNP-specific Sm-like protein LSM10; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 328 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:116748"
                     /db_xref="MGI:MGI:2151045"
     CDS             102..470
                     /gene="Lsm10"
                     /codon_start=1
                     /product="U7 snRNA-associated Sm-like protein LSm10
                     isoform X1"
                     /protein_id="XP_006502749.1"
                     /db_xref="GeneID:116748"
                     /db_xref="MGI:MGI:2151045"
                     /translation="MALSHSVKERTISENSLIILLQGLQGQITTVDLRDESVARGRID
                     NVDAFMNIRLANVTYTDRWGHQVELDDLFVTGRNVRYVHIPDGVDITATIEQQLQIIH
                     RVRNFGGKGQGRREFPSKRP"
ORIGIN      
        1 ttgtagtccg catcctgcga ggcgcatgct ctgatgctct gggtcttccg cggttgccat
       61 ggcttctctg agcctcgtga gcagccagcc aatgtggaac aatggcactg agccactcgg
      121 tgaaggagcg aactatttct gagaacagcc tgatcatcct gttgcagggc ctccaaggcc
      181 aaataaccac tgtggacctt cgggatgaga gtgtggcccg aggacgcatt gacaacgtgg
      241 atgctttcat gaatatccgc ctggccaatg tcacctatac cgaccgctgg ggacatcagg
      301 ttgagttgga tgaccttttt gtgaccggtc gtaacgtccg atacgtccat atcccagatg
      361 gtgtggacat cactgctact attgagcagc agctgcagat catccaccgt gtgcgcaact
      421 ttggtggcaa gggtcaaggt cgtcgagagt tcccctccaa aaggccatga gactgtgtcc
      481 tcgttaaagt tccagcacca cctcagggac ctccggtgtt ctgagccaac tcccggccat
      541 ccttccccac cagtaacaga catgtcacag cggcctttcg tagggttcca gttttcagac
      601 acaccctggg acccagaatt ccttctgctg gtggccttgg ggtaggtgac aatccctctt
      661 ttggatcatt tgtatctcaa atctccattc actgattgga ccccgtccat caaggagtcg
      721 tcaactctgg ctgtgaggag tactgcgagt gtttggagtg aatcacctct aacgtcccgt
      781 ttctttttgg catttgtttc tttttctcat aaaaccaaac ttggatacac aca
//
