LOCUS       XM_036159957            9003 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus limbic system-associated membrane protein
            (Lsamp), transcript variant X4, mRNA.
ACCESSION   XM_036159957
VERSION     XM_036159957.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9003
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..9003
                     /gene="Lsamp"
                     /gene_synonym="5430428I19; B130007O04Rik; D930023J12Rik;
                     Gm29907; Lam; Lamp"
                     /note="limbic system-associated membrane protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 8 ESTs, 1420 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:268890"
                     /db_xref="MGI:MGI:1261760"
     CDS             350..1450
                     /gene="Lsamp"
                     /gene_synonym="5430428I19; B130007O04Rik; D930023J12Rik;
                     Gm29907; Lam; Lamp"
                     /codon_start=1
                     /product="limbic system-associated membrane protein
                     isoform X4"
                     /protein_id="XP_036015850.1"
                     /db_xref="GeneID:268890"
                     /db_xref="MGI:MGI:1261760"
                     /translation="MRTYWLHSVWVLGFFLSLFSLQVLAFWNQPPAEVNLSPITIPGT
                     EETMRKKAKEEEGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSKVAWLNRSGII
                     FAGHDKWSLDPRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQ
                     VPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPLGREFEGEEEYLEILGI
                     TREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRQASLKCEASAVP
                     APDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTNASL
                     VLFKRVLPTVPHPIQEIGTTVHFKPKGETSGL"
ORIGIN      
        1 cctttcggct gggctccggg tcctataagg cgcttgcttg tttaagtaca gtctcattta
       61 gttggagctg caggggagta agggagagga gggtaggaaa gaagagagcg ggagagctcg
      121 aggaaaaaga gggctctctg tgctgacacc aggttcggac tgcgagcatc cttcaggacc
      181 gggctcgcgc tcttggagaa gagagcgagg ctgtgctggg attcgctggg agactgctca
      241 gtccgcgtcg ctggagctgg gagagccctg agggaaacca agggaagcga gcagcgcgtt
      301 ttactagaga gagcaggagt gaggagagac ggctggagcg cttggcgaca tgaggaccta
      361 ctggctgcac agcgtctggg tgctggggtt cttcctgtcc ctcttctcat tgcaagtctt
      421 ggcattttgg aaccagcctc ctgctgaagt aaatttgtct ccaatcacaa tcccagggac
      481 tgaagaaaca atgagaaaga aggcaaaaga ggaggaagga ctgcccgttc gcagcgtgga
      541 ttttaaccga ggcacggaca acatcaccgt gagacagggg gacacggcca tcctcaggtg
      601 tgtggtagaa gacaagaact caaaagtggc ctggttgaac cgctctggca tcatcttcgc
      661 tggacatgac aagtggtctc tggaccctcg ggttgagctg gagaagcgcc atgctctgga
      721 atacagcctc cgaatccaga aggtggatgt ctatgatgaa ggatcctaca catgctcagt
      781 tcagacacag catgagccca agacctccca agtttacttg atcgtacaag ttccaccaaa
      841 gatctccaac atctcctcgg atgtcactgt gaatgagggc agcaatgtaa ccctggtctg
      901 catggccaat gggcgccctg aacctgttat cacctggaga caccttacac cactaggaag
      961 agaatttgaa ggagaagaag aatatctgga gatcctaggc atcaccaggg aacagtcagg
     1021 caaatatgag tgcaaggctg ccaacgaggt ctcctcggcg gatgtcaaac aagtcaaggt
     1081 cactgtgaac tatccaccca ctatcacgga gtcgaagagc aacgaagcca ccacaggacg
     1141 acaagcttcc ctcaaatgtg aagcctcagc ggtgcctgca cctgactttg agtggtaccg
     1201 ggatgacacc aggataaaca gtgcaaatgg ccttgagatt aagagcactg agggccagtc
     1261 ctccctgacg gtgaccaatg tcactgagga acactatggc aactatacct gtgtggctgc
     1321 caacaagctc ggtgtcacca atgccagcct agtccttttc aagcgtgttt tacccacagt
     1381 cccccacccc attcaagaaa ttggcaccac cgtgcacttc aagccaaaag gtgaaacctc
     1441 aggactttga tgtggctaat gacatcagga cccgggtcgg tgagaggaat caacggatcc
     1501 gtcagtctgg ccgtaccact gtggctgctg gcagcgtccc tgttctgcct tctcagcaaa
     1561 tgttaataga ataaaaattt aaaaataatt acaaaaacac acaaaaatgc gtcacacaga
     1621 tacagagaga gagagaaaga gtgcaagatg gggggagact attgtttcac aagattgtgt
     1681 gtttataaat gaagggggaa tatgaaaaat gaagaaaata caacactaaa aacagtttta
     1741 agatccttca ataaaaatct gagtataatt tagggtggga aagcttctcc ccgaatatgt
     1801 gtctatcttc taagcaaatg actgctgtgt aaagattcca tcatgctaag gacatctgat
     1861 gttgtacaaa tgagactatt caagaagtac caggtggcta ttaagtcccc ccacacttta
     1921 tccttccttc atccattttc atctgtgggg aaaaagaagg tcttgccttt ggtgtttata
     1981 tttccataat ctttttattc tgtttttcat ttgagctgat gtgtcgccat tttggactat
     2041 caacggaaac ctgtgttgag cctttctcag gctcccctgc ctggatcatc tctcttagct
     2101 tttaagaaca taccttttcc ccatccagtg tgttctatcc cctcagctca cccattccaa
     2161 atattcccct tttctctacc cccacctccc ttttgcccca gcaacccaga acacgagtca
     2221 cgccgcaaac tttaggaagt accattttca tcttctccac tgtgcgcgtg cgtgtgctca
     2281 agtctctcgc tctcacgtag atgtacatgt gtgcgagcgt gtatgtgtct ttctctaaag
     2341 catgccaggg gaatggtcca tgtgtacata gacccattgt gctgtagata ctgtcctgca
     2401 ctgtagttgt gaggtgcggc tgtcacgagt tgctgggggg gacgggctgg gtgggaggcc
     2461 aggagcagaa ttcctccccc tttcatggcc gtcacatgat atccgtgtgc attcaaaacc
     2521 aagctgtgct cctttcgagg gcaggacccc atacccctcc tggtctcatt ttcagaaccc
     2581 agctgggagt cactcagaat atcactgtac atgaaagtgc ctactatcaa tggggtgagc
     2641 agacagggaa cagacccgtg gcctgcataa tatcacctag gggaggaaga tggtcgctga
     2701 tttcactctc agtgtgcaag cctggagaat ccatcagttt catagcttta taaaggctga
     2761 gccccactgc aaaaaggagc cgtgtgtatt gagcaaatct ccagagacaa gtgggtatct
     2821 gaatggtggc ccctccccca ccaagggaag aggagcccaa ggtgacccta agcagacctg
     2881 ctttgtccct tcactaatct tcaagtaaca ctgcatttgc tccataatgc ccttaattgg
     2941 agattgttgg tccaataaaa tattgtgaat gagacataaa atagacccga gtcttctgta
     3001 gaggctgcta aacttctaat gcaaagtatt ggtcatcaca aattaggaaa tccaggcttt
     3061 gttctccttt atggattctt atccttgagt tcaaggccaa cgctttatgg gcttccagcc
     3121 ccactgctga tgcgcgtggc accattgccc atagaggcca gtcaataccc caagccaggc
     3181 cactggggca ctgattgcac tcaccttccc tactctgttt agacttatct ctgtgagagt
     3241 cctcttcaca ctaacactga aagctgagct atttgcttaa ccataaggaa ggtctgagca
     3301 atgtgggatg agtccaagca gcagtatgag cattccaaag cccgacatca tcacatcgcc
     3361 aacagagttg gcctagggga catcttacag gaaggctgcc tctctgcatg tggtgggtta
     3421 tctttgctag aaaaccagtg gctactttcc cttaaaactg tatagaagca tccaaagtga
     3481 ttcaccttga gaaaggatga agggttattg ctgaggtcat aatgtgatgt taccttacag
     3541 agccatggca catcaagttt tctaaccttt gaaatggctg tcacatgata caaaatgaag
     3601 ggaaagaggg aagaatagga agaaaaggaa ggagggagga aagaagaagg gaaggaagga
     3661 gggaggaagg ggtagaggag gaaagggggg agggaagaaa aaaggaattt gagcagaatt
     3721 ttatatttct tctagcaatt acatcacttt ataaatctgt cacatcctag cttcatggtt
     3781 tgcagttttg acatgatcca gaggacagac agggttcagg atgcagaaaa gtatttatgg
     3841 atgatcaaga gataggatgg ggattcctat ccaagagggt agctagtaat acatagggaa
     3901 ggggtgccat attccaatat gatacattgg caatcaagga ttctctagaa gtttagtcct
     3961 cttgtactac aactgaagga tatgtgtttg ccatgttcag agccctccac atccttaagt
     4021 aaagtcttag aagagtacat gctggcctag atagtgggaa taaggaaatg tgagttaatt
     4081 ccgcatcatt tagtattagt ttccaaaaat ggatacctgt gacatatcat aagctttgat
     4141 aatgcacctg gccttcaggg tccccatcct attataagga caagctctgg ggttttgtca
     4201 gaggaatatc tcctttggaa agaattcctg gtcattccaa taccatatat tctttttgtt
     4261 ttattataat ggcccataga gcgaacagct aacgattctt ttacaatgcg gtgtttgccc
     4321 ataactccag caagatctga gattcttttt aagaatgtct ctcctctatg gagaaaacct
     4381 aagtctcatc gtaggccgca taggttttag aatgttgcta cgtcacatgc agaactgaga
     4441 aactgttctt tggagcaaga ttagaatcac tatcaggcca gatggcctac accaagatgt
     4501 catacaattg acagaaaaat ccatccactg atctcacttg ttggtaatca aagtactgaa
     4561 tacaaacaag tgattggaac aaataggtag catggagtga aggggttgca tccataaacc
     4621 aggaacactc acggattcca tatcctttgc atacaaagtg aaagttatgc cattcataag
     4681 acaaaacttt agcctcagct ttcagtttaa aaagtagaaa ttaccttgac ctagggcagg
     4741 ccccaaagaa ggatagcttt cctggattct acaactgcag aactgtctgt tctccttgca
     4801 gttggtgatc aaaacaactt tgcctcgtga gaggcacatt tttcttgtga cacttaaaat
     4861 cactttctcc caaaacaatg acaacttatg gaaaagtaga tgcgttttct gtctggaagg
     4921 atttcccctt agctcttgtg ttctcttcca agacagacaa atatttttcc ccttaccatg
     4981 aacttttttg ttgtttgttt gttaaattca ttagacaact gaggctattc aaagagacct
     5041 tataacaata ctcgtgattt tttacgttct tggaggaccg aaacaaaagt atgtttctcc
     5101 tccaaagatg gactttacct cctctgccta cagaaactaa attcctcagc gtgaaactgc
     5161 tttttaagtc ctttcttctc agcccacagt cacagggtcc tctctgagat gactaccatg
     5221 tgacatcttt tattggctag tcttcctaaa gttttaattt tgttctttac aggctttggg
     5281 ttctttgtga aaaaaaatta tatgtgtgtg tatgtattgt tttagatctt atcgttacaa
     5341 atgatatatt tacaacaatg tatgtattgt aggaaaactt tagaatgatg gtttaaactt
     5401 aaaaggaaga gagataatga atttggttta tttttttaaa aagtgctagg cttcatttag
     5461 aaaaatgtgg atgcctttct gcccactttg ttactttttg tttaaaggaa atttgcttaa
     5521 gagaccacct gctataggat taaccatgtc ctcatgtttt tctttattct cacagattct
     5581 cagcctagat ttagtcttgg ttcccctgta aactgccagt ttgtataaca atgtaagagc
     5641 agtgttacat ttgacctaaa aagctattaa aactctgaag acaaacacac cagaaaaaaa
     5701 tgtgagatag accccaagtt aagaaacaca aacctacttt aggaaatctt tcgtgcttaa
     5761 gttattaaaa atgtttctcc tccagagact tagtctgccc aagtgatgta aattccccat
     5821 tatggttgac atcatatctg taaacatctc actaaatgta aaatgaagtt cgcatttacg
     5881 tgcacaccgg tggggaggaa cgtaaacccc cctcgtttgc atttagctct gctgctcaaa
     5941 tgtcaccaag tgaacctcaa gaaggaattt ggttttgctc ccagtgtata gcacattctt
     6001 cttggtgagg tggctggcgt taagcttagg tttagattta gcattcacgc cagtggaatg
     6061 tttatggata ttgtagaaaa cttattttta aaatcctgat ttctcgtcag cgcatttgca
     6121 tactgtgctg attaataaat taggcaccaa tcatgtgtaa atcaatgtaa atcactagtt
     6181 tatgtacata atataaacta tgtaaacttc atttttcatg cagagcccaa gttcagctaa
     6241 acctataaat cttaaagaaa aagaagtcaa aataagaaga acaaaaccca aagctctttg
     6301 taggtcagtg gacttagaag caagcctgac atggttacaa atgtgttgcc ttagccaaag
     6361 gaagcagaca ctcagaacac ttagacgctc ttctagccaa ggtcagctgg ctttctttgc
     6421 tccttctccc tcagtggaga ttctccagcc tgacccaacc aaccctaggc aaacggaaag
     6481 aaagaggact aggatagcag ggactcctgg gcctgggtta ctggtttctt gccagctaat
     6541 acatattata ttgtgtcttt atttaaatcg ctccaacaga ttcaccagta cttacatgaa
     6601 cagattatta cacactcccc attttttgga ctgttttaca cttaaccaga ctcagcaaat
     6661 atctttgtca tcctaatttg aaatatgtta tatccttgag aaatattttg ctgaatctcc
     6721 ctgtatcatt attatcatca tcattattat tattatcatc attatccctg gcagccttgt
     6781 ggatctacag gccaatggat taaaagtaag gtacaaagtc atttgaatga aaatgtcact
     6841 cccaggtgta tctgctgatt taacagtgtc ccatagacct ttactttatt taatcagaac
     6901 gactgacaga ctcatcaaga gagatgatat gaatgtcata ccagactatt gtaggaagag
     6961 atttcacact gaggcttaca ttcatctacc aaggacaaag ggcatctgta acatgaaagg
     7021 tgtatcagga ttggagccaa gaaaatgggg ctgttgcttt gggtctcgcc acacaaaaag
     7081 ctgtgagatg ctgacacagg caagttaatt ccagttcctg agtttttagt tttctcatct
     7141 ggaaagtcaa gaattcaaag gacacttcat ggtctctccc acctctaaac cttctgattc
     7201 tgactatgaa ttaaaattca ttaaatgctg ccacccacga agagctattt gctggtctct
     7261 ggttttctct aaacccaccc ccctctgtct ccacaacata gcaccttcta gaaccacagg
     7321 ggctctggac cagttctgta tctcttttct gagaaaattt cttagagata cagaggaaag
     7381 gcattttcat attaaagcga gggcaccaaa atagctgagg tggctgcctt gttcgtaata
     7441 ttgggaaatg taacagttga actgtagcct aatagccttt catgggtagg aaaatggcca
     7501 gatcgggcat tatgtacgta acaaatgagg aagttgcaca tgtgagagga aatatcagct
     7561 ttctcttatc cttggccaag tgcttcatta tggtaaatgt gtgtcactgg gcgttgtcag
     7621 ctggtcccaa gcaagttcaa aaaaggctgt tttgtgaaaa acaggcaaga gaaggggttt
     7681 cttacagacg tttcttgaga cttgactaat aaatagactg tgagattgac caagtggtta
     7741 cagaggggcc tctttttatt tttttatttt ttttaacagc ttgaattggt atagtttaaa
     7801 gcagccatga gtgaaacagg acaaaaaagc ctatctggga ggcagggtta aaagagagtg
     7861 agagatgtaa aagctaaaac caaatgtgaa agttaagttt ccggagcagt aacggaggga
     7921 ttgttctgtt gggccacatc ctgagccgac tcagcgcagg tccacttgtg agtcccactc
     7981 tgtcttcacc attcagctca acaccttgtc cggtcacctt tttttcatga atcttcccaa
     8041 agagcacaaa gaatagggct ctcctggaca ccgaggagca gagttcactc atcaccacct
     8101 ccggcgttag gtatcactgt ttatatgagg atgcgcagtg ggtttacggt actctggaca
     8161 ctctgtaagg ggagagagac ccgcccaccc aacacctccc cagtcccatc gatccttcct
     8221 aggcacagct ttttggatgg tgctcgtgag tccacccgac agctacattc ttcccaacac
     8281 aaccccccct gtgtaatatc taggcacggt aaaaatctgc ttcttgcaat tgaagaaaat
     8341 ccacggagct agcttcctgg cgtaccacag caaccctcgc cacccgtcag gagcctcttt
     8401 tgaactccct tacctaagtc tttgctcttc acctgagcat gaacacggtt catcctggtg
     8461 aacttcggcc acgttctgct ccataagtat ttgctggggg gggggggggg gggctaaagg
     8521 gaggaaataa aaaggggagg gaaggatacc tcccacttct ccccagccct gcttcaccct
     8581 ccctttccat ttgctctcct ggaggttgta taaatcctgt tcttggttag acgtctcctc
     8641 attaacagtg ttatatgcat ataaatatat atataaaata tattcctttt ttccagccct
     8701 gtagacatga actgatcttc ccttgacgat ataaaaacat ggccattttc tggttcagtt
     8761 gatttgtcgc tcaagttact ttatttttgt ttattgggtg gatatttttt ccctgaatac
     8821 tagctctgtg aaggaaagta aaaaagcgca atgtgtgtaa aaaaaaatta aaattaaaga
     8881 aaagcttttt tttttctttt taaatgtatt taaattctgg ttctctcttc tgttacttta
     8941 cacgtatgaa tgctctgctc ttctgtgatc ttaaaacaaa atgaaataaa cgtgaaaagg
     9001 aga
//
