LOCUS       NM_001357584             774 bp    mRNA    linear   ROD 07-MAY-2024
DEFINITION  Mus musculus leucine rich repeat containing 51 (Lrrc51), transcript
            variant 4, mRNA.
ACCESSION   NM_001357584 XM_006508182
VERSION     NM_001357584.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   3  (bases 1 to 774)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   4  (bases 1 to 774)
  AUTHORS   Ahmed,Z.M., Masmoudi,S., Kalay,E., Belyantseva,I.A., Mosrati,M.A.,
            Collin,R.W., Riazuddin,S., Hmani-Aifa,M., Venselaar,H., Kawar,M.N.,
            Tlili,A., van der Zwaag,B., Khan,S.Y., Ayadi,L., Riazuddin,S.A.,
            Morell,R.J., Griffith,A.J., Charfedine,I., Caylan,R., Oostrik,J.,
            Karaguzel,A., Ghorbel,A., Riazuddin,S., Friedman,T.B., Ayadi,H. and
            Kremer,H.
  TITLE     Mutations of LRTOMT, a fusion gene with alternative reading frames,
            cause nonsyndromic deafness in humans
  JOURNAL   Nat Genet 40 (11), 1335-1340 (2008)
   PUBMED   18953341
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC167240.5.
            
            On Nov 4, 2017 this sequence version replaced XM_006508182.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU962041.1, CN842432.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AC167240.5         103982-104038
            58-195              AC167240.5         104433-104570
            196-401             AC167240.5         109440-109645
            402-550             AC167240.5         111624-111772
            551-774             AC167240.5         111995-112218
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.69 cM"
     gene            1..774
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /note="leucine rich repeat containing 51"
                     /db_xref="GeneID:69358"
                     /db_xref="MGI:MGI:1916608"
     exon            1..57
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /inference="alignment:Splign:2.1.0"
     exon            58..195
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /inference="alignment:Splign:2.1.0"
     exon            196..401
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /inference="alignment:Splign:2.1.0"
     exon            402..550
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /inference="alignment:Splign:2.1.0"
     exon            551..774
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /inference="alignment:Splign:2.1.0"
     regulatory      747..752
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /note="hexamer: AATAAA"
     polyA_site      774
                     /gene="Lrrc51"
                     /gene_synonym="1700008D07Rik; Lrtomt"
                     /note="major polyA site"
ORIGIN      
        1 agagtacgat tctggagact atgactgcgg tccacaactg actcggctta actctgggct
       61 gaagccagac tcccagggcc catgcttcca cctgatgaat gatggcctga actatgagct
      121 cacgggacta tatgaacact tccgtgcagg agcctcctct tgactactcc ttcaaaagcg
      181 tccaaatggt ccaagatctg gtaaccgagg agccaaggac aggtctacga ccggtgaggc
      241 actcaaagtc aggaaagtca ctgacccagt ccctgtggct caacaacaat gtcctcaatg
      301 atctgaaaga cttcaaccag gtggtttcac agcttctaca gcatccagag aatctggcct
      361 ggattgacct ctccttcaat gacctgacta ccattgaccc tgtcctaaca acattcttca
      421 acctaagtgt cctctacctt cacggcaacg gcatccatcg cctaggggag gtgaataagc
      481 tagctgtcct ccctcgtctc cggagcctga ccctccatgg gaaccccata gaggaagaaa
      541 aggggtacag gcagtatgtg ctgtgcaacc tgccccgtat caccacgttt gacttcagtg
      601 gagtcaccag ggccgatcgc agcacagctg aagtctggaa acgcatgaac atcaagccca
      661 agaaggtccg ggccaagcag gatgttctct gagattcgca ggacccagca caccgaatgc
      721 cctgaggata atcagcttgg tttgacaata aatgatttga gctgttgaac agat
//
