LOCUS       NM_201226               3395 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA.
ACCESSION   NM_201226 XM_149540
VERSION     NM_201226.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU514662.1, BU148242.1, AK129306.1 and AK013512.1.
            
            On Jan 26, 2004 this sequence version replaced XM_149540.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK129306.1, AK154897.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-24                BU514662.1         1-24
            25-191              BU148242.1         19-185
            192-1472            AK129306.1         1-1281
            1473-3271           AK013512.1         450-2248
            3272-3393           AK013512.1         2250-2371
            3394-3395           AK129306.1         3203-3204
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 83.79 cM"
     gene            1..3395
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /note="leucine rich repeat containing 47"
                     /db_xref="GeneID:72946"
                     /db_xref="MGI:MGI:1920196"
     exon            1..634
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..1759
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 47"
                     /protein_id="NP_957678.1"
                     /db_xref="CCDS:CCDS19006.1"
                     /db_xref="GeneID:72946"
                     /db_xref="MGI:MGI:1920196"
                     /translation="MAAAAMAVSEAWPELELAERERRRELLLTGPGLEERVKAAGGRL
                     PPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALGPGLSPELGPLPA
                     LRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADLARCAPRLQSL
                     NLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLSNNQLTE
                     IPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSKGRQEAS
                     EKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKDVRPY
                     IVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAARP
                     PEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL
                     VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAELSKS
                     TSENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPS
                     KTDLITLPPHVTVVR"
     exon            635..1087
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     exon            1088..1204
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     exon            1205..1320
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1423
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     exon            1424..1513
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
     exon            1514..3395
                     /gene="Lrrc47"
                     /gene_synonym="2900010D03Rik; mKIAA1185"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacgggcggc gcgatggcgg cggcggcgat ggccgtgtcc gaggcctggc cggagctgga
       61 gctggccgag cgcgagcggc ggcgcgagct gctgctgacc gggcccgggc tggaggagcg
      121 ggtgaaggcg gcgggcgggc ggcttccgcc gcggctcttc acgctgccgc tgctgcacta
      181 cctggaggtg agcggctgcg gcagcctgcg cgcgccgggg cccggcctcg cgcagggcct
      241 cccgcagctg cacagcctgg tgctgcggcg caacgcgctg gggccgggcc tgagccccga
      301 gctggggccg ctgcccgcgc tgcgcgtcct cgacctgtcc ggcaacgcgt tggagacgct
      361 gccgcccggc gagggcctgg gccccgccga gccccccgga ctaccgcagc tgcagagcct
      421 caacctcagc ggcaaccgcc tgcgcgagct gcccgccgac ctggcgcgct gcgcccctcg
      481 cctgcagagc ctcaatctca ccggcaaccg cctggacgcc tttccccccg agctcttccg
      541 gccaggagct ctgcccctgc tcagtgagct ggcagctgcc gacaactgcc tgcgggagct
      601 cagcccagac atcgcgcatc ttgcctcgct caagacattg gacctctcca acaaccaact
      661 aacagagatc cctgctgagc tggcagactg ccccaagctc aaagagatca actttcgagg
      721 aaacaggctt cgagacaagc gcctggagaa gatggtgggt ggctgccaga ccaagtccat
      781 cctagagtac cttcgtgctg gtggccgcgg cggccggagc aagggccggc aagaggcctc
      841 tgagaaggag gacagaaaga agagacggga gcggaagcag catcgggaaa gcggggaggg
      901 cgaggaggag gtagcagact cagccaggct gatgctcaag gtcttgcatg tctctgagaa
      961 ccccacaccc ctgacagtca gggtgagccc ggaggtcaag gatgtgcgcc catacatcgt
     1021 cggggccatt gtgagaggca tggacctgca gccaggaaat gcactccgtc gctttctcaa
     1081 ctcccagacg aagctccacg acgacctctg cgagaagagg acagcagcga ccatcgcgac
     1141 ccatgacctc caggctgtgc gtggacccct gctgtatgca gcccggccgc ccgaggacct
     1201 caagattgtg cctttgggac ggaaagaggc caaggccaag gagctcgtgc ggcagctgca
     1261 gctggaggcc gaggaacaga gaaagcagaa gaagaggcag agcgtctcag ggctgcacag
     1321 gtaccttcac ctcctggatg ggaaggagaa ctacccctgt cttgtggatg ccgagggaga
     1381 cgtgatttct ttccctccta taacaaacag tgagaagaca aagattaaga aaaccacctg
     1441 caacttgttc ttggaagtaa cgagtgccac tagcctgcag ctctgtaagg acatcatgga
     1501 cagccttatc ctgagaatgg cagaactgag caaaagcact tcagaaaata aagaggaaga
     1561 catgctctca gggacggaag ctgatgccgg ctgtgggctt tctgatccca acttgactct
     1621 gagctctggg aaggatggac agtgccctct ggtggtggag caggtccgag tggtggacct
     1681 ggaagggagc ttgaaggtgg tgtacccatc caagacggac ctgatcaccc tccctcccca
     1741 cgtgactgtg gtccgctgac aggctcctgt aggtgtgggt gtgctgtagg tgtctgtgtg
     1801 ggtgtgggtg tgctgtaggt gtctgtgtgg gtgtgggtgt gctataggta tctgtgggtg
     1861 tgctgtaggt gtctgtgtgg gtgtgctgta ggtgtctgtg taggtgtggg tgtgctgtag
     1921 gtgtctgtgt gggtgtgcta ggtgtctgta taggtgtggg tgtgctgtag atgtctgtgt
     1981 aggtatgggt gtgctgtaga tctttgtagg tgtaggtatg ctgtaggtat ctgggtgtgg
     2041 gtatgctgta gatgtctgtg taggtgtgga tatgctgtag gtatctgggt gtgctgtagg
     2101 tgtctgtgtg ggtgtgggtg tgctgtgggt gtctgtgtgg gtgtgctgta ggtgtctgta
     2161 ggtgtgggta tgctgcaggt gtgggtgtgc tgtagatctc tataggtgtg ggtgtgctgt
     2221 aggggtctgt gtgggtatag gtgtgggtgt gctgtagatt ctgtgtaact ggttctttgc
     2281 tgtttctctg ggtgttttaa ggtgtctgct tttgtccagg tgactgtggt aatgtgagtt
     2341 tgcatcatca tcatagctcc aatgtgactc tcctgtctcc tgtcctcatg gatcactcag
     2401 taactgctgg ggatgttctg aatcatgtgg cctgtggccg tgctggagag tcaggttgaa
     2461 cgcaggcatt ctattgaaca gtatttattt ttctacaaca tgttaataga attttttttt
     2521 aaatcagctg tgcatagaca gttgagaaca tcatgttgtg agtgtaatct tcttagagct
     2581 tgtttccagg caccgtgctg ccgccatgct cccagggcag catctgcctt ccacggctgt
     2641 gcttggaact gtagtgctgg tcgttgttgg cacatctgcg ccttggccaa ggaagttatc
     2701 tatgtccgtg tagtcctttg tagtcagaca gatgcttcgt ggactgtgcc tcacacatgg
     2761 ccctgcaggc tccatgtcag cgtgtcccac tattcatgtc ccatctctgt gcatcctgac
     2821 tgcgcacatc ccatctccgc atgtgtacgc atctgtacca gcacacagct gccatccctc
     2881 gagccacagt gcctggtcct aaggacccag cagctgcaca gaggacttgg tggccccgtg
     2941 ccttgccatc tggctgagaa gagaaccaga ccctcagcct tccccctcga caccttctcg
     3001 ttggtgacct ctgaccttaa aggaccattt ctaccttctg taaaagaaca cctgtttggg
     3061 gttgcgtgcg gctttcatcc taaggccgtg cgagagccgt tagctgtcag aactagtgaa
     3121 gctccaggct cctcgtggca gaccctggac aacgctggta gctgttctcc atgagacacg
     3181 gctgctcaca ggtccctttg agtggctgtg gcaagtactc acctactaag tgtttagggt
     3241 ggagctatcc tgtgctcacc ctgtctcccc ccagttcctg ctgttccctc cagcccagcc
     3301 cagcccaggt gtgagattca ttgagatttt tgaaactgtt tttacagatt caagcagaac
     3361 gcctctttgt tctaataaaa acccttggta acgac
//
